Data-Wrangling/index.Rmd at gh-pages · fhdsl/Data-Wrangling · GitHub

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---
title: "SISBID Module 1"
output:
  html_document:
    theme: cosmo
  pdf_document: default
---

## Data Wrangling with R

**Instructors:** `r config::get("instructors")`

**Class Schedule:**

* M/T: 8am-2:30pm PST, W: 8am-11am PST

* Location: Zoom (see class email or Slack for link)

**Software:**

Please install the latest versions of R and RStudio:
https://sisbid.github.io/Data-Wrangling/00_Setup/Setup.html

<!--
**Resources:**

* [Rstudio Cloud Class Project Homepage](https://rstudio.cloud/spaces/21228/projects)
* [Rstudio's cheatsheets](http://www.rstudio.com/resources/cheatsheets/)
* [R for Data Science](http://r4ds.had.co.nz/)
* [JHU Cloud-Based Data Science](https://leanpub.com/universities/set/jhu/cloud-based-data-science)
* [Git for Humans](https://speakerdeck.com/alicebartlett/git-for-humans)
* [GitHub Labs](https://lab.github.com/)
* [swirl](http://swirlstats.com/)
* [Datacamp](http://datacamp.com/)

-->

**Schedule**

|             | **Lecture**                                               | **Lab**               | **Lab Key**                          |
|-------------|-----------------------------------------------------------|-----------------------|--------------------------------------|
| **Day 0**   |                                                           |                       |                                      |
|             | [Setup][01] ([PDF][02])                                   |                       |                                      |
| **Day 1**   |                                                           |                       |                                      |
| 8:00-8:50   | [Introduction][03] ([PDF][04])                            |                       |                                      |
| 8:50-9:05   | Break                                                     |                       |                                      |
| 9:05-9:55   | [Data Input/Output Part 1][05] ([PDF][06]/[Rmd][07])      | [lab][08]             | [lab key][09] / [lab key output][10] |
| 9:55-10:10  | Break                                                     |                       |                                      |
| 10:10-11:00 | [Data Input/Output Part 2][11] ([PDF][12]/[Rmd][13])      | [lab][14]             | [lab key][15] / [lab key output][16] |
| 11:00-11:30 | Break                                                     |                       |                                      |
| 11:30-12:20 | [Reproducible Research][17] ([PDF][18])                   | [lab][19]             | [lab key][20] / [lab key output][21] |
| 12:20-12:35 | Break                                                     |                       |                                      |
| 12:35-1:25  | [Data Subsetting Part 1][22] ([PDF][23]/[Rmd][24])        | [lab][25]             | [lab key][26] / [lab key output][27] |
| 1:25-1:40   | Break                                                     |                       |                                      |
| 1:40-2:30   | [Missing Data][28] ([PDF][29]/[Rmd][30])                  | [lab][31]             | [lab key][32] / [lab key output][33] |
| **Day 2**   |                                                           |                       |                                      |
| 8:00-8:50   | [Data Subsetting Part 2][34] ([PDF][35]/[Rmd][36])        | [lab][37]             | [lab key][38] / [lab key output][39] |
| 8:50-9:05   | Break                                                     |                       |                                      |
| 9:05-9:55   | [Data Summarization][40] ([PDF][41]/[Rmd][42])            | [lab][43]             | [lab key][44] / [lab key output][45] |
| 9:55-10:10  | Break                                                     |                       |                                      |
| 10:10-11:00 | [Data Cleaning Part 1][46] ([PDF][47]/[Rmd][48])          | [lab][49]             | [lab key][50] / [lab key output][51] |
| 11:00-11:30 | Break                                                     |                       |                                      |
| 11:30-12:20 | [Data Cleaning Part 2][52] ([PDF][53]/[Rmd][54])          | [lab][55]             | [lab key][56] / [lab key output][57] |
| 12:20-12:35 | Break                                                     |                       |                                      |
| 12:35-1:25  | [Data Reshaping][58] ([PDF][59]/[Rmd][60])                | [lab][61]             | [lab key][62] / [lab key output][63] |
| 1:25-1:40   | Break                                                     |                       |                                      |
| 1:40-2:30   | [Data Merging and Joining][64] ([PDF][65]/[Rmd][66])      | [lab][67]             | [lab key][68] / [lab key output][69] |
| **Day 3**   |                                                           |                       |                                      |
| 8:00-8:50   | [Factors][70] ([PDF][71]/[Rmd][72])                       | [lab][73]             | [lab key][74] / [lab key output][75] |
| 8:50-9:05   | Break                                                     |                       |                                      |
| 9:05-9:55   | [Functional Programming Part 1][76] ([PDF][77]/[Rmd][78]) | [lab][79]             | [lab key][80] / [lab key output][81] |
| 9:55-10:10  | Break                                                     |                       |                                      |
| 10:10-11:00 | [Functional Programming Part 2][82] ([PDF][83]/[Rmd][84]) | [lab][85]             | [lab key][86] / [lab key output][87] |
|             | [Wrap Up][88] ([PDF][89])                                 |                       |                                      |

[01]: 00_Setup/Setup.html
[02]: 00_Setup/Setup.pdf

[03]: https://docs.google.com/presentation/d/1-jw_njYpdg46WClUVtLwLTb9TyD25cudvzNhKEJuXkA/edit?usp=sharing
[04]: 01_Introduction/sisbid_intro_2025.pdf

[05]: 02_Data_IO/Data_IO_Part1.html
[06]: 02_Data_IO/Data_IO_Part1.pdf
[07]: 02_Data_IO/Data_IO_Part1.Rmd
[08]: 02_Data_IO/lab/data-io-lab-part1.Rmd
[09]: 02_Data_IO/lab/data-io-lab-part1-key.Rmd
[10]: 02_Data_IO/lab/data-io-lab-part1-key.html

[11]: 02_Data_IO/Data_IO_Part2.html
[12]: 02_Data_IO/Data_IO_Part2.pdf
[13]: 02_Data_IO/Data_IO_Part2.Rmd
[14]: 02_Data_IO/lab/data-io-lab-part2.Rmd
[15]: 02_Data_IO/lab/data-io-lab-part2-key.Rmd
[16]: 02_Data_IO/lab/data-io-lab-part2-key.html

[17]: https://docs.google.com/presentation/d/1zFT-rvoN_T88CrDBCaPNDKVME52wUn5AIvLS7VVDqu4/edit?usp=sharing
[18]: 04_Reproducible_Research/sisbid_rep_research_2025.pdf
[19]: 04_Reproducible_Researchlab/rmarkdown-lab.Rmd
[20]: 04_Reproducible_Researchlab/rmarkdown-lab-key.Rmd
[21]: 04_Reproducible_Researchlab/rmarkdown-lab-key.html

[22]: 05_Data_Subsetting/Data_Subsetting_Part1.html
[23]: 05_Data_Subsetting/Data_Subsetting_Part1.pdf
[24]: 05_Data_Subsetting/Data_Subsetting_Part1.Rmd
[25]: 05_Data_Subsetting/lab/data-subsetting-lab-part1.Rmd
[26]: 05_Data_Subsetting/lab/data-subsetting-lab-part1-key.Rmd
[27]: 05_Data_Subsetting/lab/data-subsetting-lab-part1-key.html

[28]: 06_Missing_Data/Data_Missing.html
[29]: 06_Missing_Data/Data_Missing.pdf
[30]: 06_Missing_Data/Data_Missing.Rmd
[31]: 06_Missing_Data/lab/missing-data-lab.Rmd
[32]: 06_Missing_Data/lab/missing-data-lab-key.Rmd
[33]: 06_Missing_Data/lab/missing-data-lab-key.html

[34]: 05_Data_Subsetting/Data_Subsetting_Part2.html
[35]: 05_Data_Subsetting/Data_Subsetting_Part2.pdf
[36]: 05_Data_Subsetting/Data_Subsetting_Part2.Rmd
[37]: 05_Data_Subsetting/lab/data-subsetting-lab-part2.Rmd
[38]: 05_Data_Subsetting/lab/data-subsetting-lab-part2-key.Rmd
[39]: 05_Data_Subsetting/lab/data-subsetting-lab-part2-key.html

[40]: 08_Data_Summarization/Data_Summarization.html
[41]: 08_Data_Summarization/Data_Summarization.pdf
[42]: 08_Data_Summarization/Data_Summarization.Rmd
[43]: 08_Data_Summarization/lab/data-summarization-lab.Rmd
[44]: 08_Data_Summarization/lab/data-summarization-lab-key.Rmd
[45]: 08_Data_Summarization/lab/data-summarization-lab-key.html

[46]: 09_Data_Cleaning/Data_Cleaning_Part1.html
[47]: 09_Data_Cleaning/Data_Cleaning_Part1.pdf
[48]: 09_Data_Cleaning/Data_Cleaning_Part1.Rmd
[49]: 09_Data_Cleaning/lab/data-cleaning-lab.Rmd
[50]: 09_Data_Cleaning/lab/data-cleaning-lab-key.Rmd
[51]: 09_Data_Cleaning/lab/data-cleaning-lab-key.html

[52]: 09_Data_Cleaning/Data_Cleaning_Part2.html
[53]: 09_Data_Cleaning/Data_Cleaning_Part2.pdf
[54]: 09_Data_Cleaning/Data_Cleaning_Part2.Rmd
[55]: 09_Data_Cleaning/lab/data-cleaning-lab-part2.Rmd
[56]: 09_Data_Cleaning/lab/data-cleaning-lab-part2-key.Rmd
[57]: 09_Data_Cleaning/lab/data-cleaning-lab-part2-key.html

[58]: 11_Data_Reshaping/Data_Reshaping.html
[59]: 11_Data_Reshaping/Data_Reshaping.pdf
[60]: 11_Data_Reshaping/Data_Reshaping.Rmd
[61]: 11_Data_Reshaping/lab/data-reshaping-lab.Rmd
[62]: 11_Data_Reshaping/lab/data-reshaping-lab-key.Rmd
[63]: 11_Data_Reshaping/lab/data-reshaping-lab-key.html

[64]: 12_Data_Merging/Merging_Join.html
[65]: 12_Data_Merging/Merging_Join.pdf
[66]: 12_Data_Merging/Merging_Join.Rmd
[67]: 12_Data_Merging/lab/merging-lab.Rmd
[68]: 12_Data_Merging/lab/merging-lab-key.Rmd
[69]: 12_Data_Merging/lab/merging-lab-key.html

[70]: 13_Factors/Factors.html
[71]: 13_Factors/Factors.pdf
[72]: 13_Factors/Factors.Rmd
[73]: 13_Factors/lab/factors-lab.Rmd
[74]: 13_Factors/lab/factors-lab-key.Rmd
[75]: 13_Factors/lab/factors-lab-key.html

[76]: 14_Functional_Programming/Functional_Programming.html
[77]: 14_Functional_Programming/Functional_Programming.pdf
[78]: 14_Functional_Programming/Functional_Programming.Rmd
[79]: 14_Functional_Programming/lab/functional-program-lab.Rmd
[80]: 14_Functional_Programming/lab/functional-program-lab-key.Rmd
[81]: 14_Functional_Programming/lab/functional-program-lab-key.html

[82]: 14_Functional_Programming/Functional_Programming.html
[83]: 14_Functional_Programming/Functional_Programming.pdf
[84]: 14_Functional_Programming/Functional_Programming.Rmd
[85]: 14_Functional_Programming/lab/functional-program-lab.Rmd
[86]: 14_Functional_Programming/lab/functional-program-lab-key.Rmd
[87]: 14_Functional_Programming/lab/functional-program-lab-key.html

[88]: https://docs.google.com/presentation/d/1ZGf90Ho1UeT0k1V9NwSxQYUk4ZtU9L-UY0RfoOa96OU/edit?usp=sharing
[89]: 16_Wrap_Up/sisbid_wrap_up_2025.pdf


**Miscellaneous**

Feel free to submit typos/errors/etc via the github repository associated with the class:
https://github.com/SISBID/Data-Wrangling

```{r, eval = FALSE, echo = FALSE}
## Render this file:
rmarkdown::render('index.Rmd')
```

This page was last updated on `r Sys.time()` Eastern Time.