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conservation track has hanging. commented out of Figure 14.
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scripts/Tutorial_Module4_Part2_cummeRbund.R

Lines changed: 2 additions & 2 deletions
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@@ -136,8 +136,8 @@ trackList<-c(trackList,genetrack)
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#trackList<-c(trackList,biomTrack)
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#Add conservation levels
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conservation<-UcscTrack(genome="hg19",chromosome=myChr,track="Conservation",table="phyloP100wayAll",from=myStart-2000,to=myEnd+2000,trackType="DataTrack",start="start",end="end",data="score",type="hist",window="auto",col.histogram="darkblue",fill.histogram="darkblue",ylim=c(-3.7,4),name="Conservation")
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trackList<-c(trackList,conservation)
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#conservation<-UcscTrack(genome="hg19",chromosome=myChr,track="Conservation",table="phyloP100wayAll",from=myStart-2000,to=myEnd+2000,trackType="DataTrack",start="start",end="end",data="score",type="hist",window="auto",col.histogram="darkblue",fill.histogram="darkblue",ylim=c(-3.7,4),name="Conservation")
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#trackList<-c(trackList,conservation)
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plotTracks(trackList,from=myStart-2000,to=myEnd+2000)
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#Close pdf device - necessary before you can open it in your browser

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