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2025-LUST/3_Advanced/3_03_slurm_jobs/index.html

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@@ -4966,7 +4966,7 @@ <h3 id="configuration_1">Configuration<a class="headerlink" href="#configuration
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<p>Before using <code>--job</code>, let's make sure that EasyBuild is properly configured:</p>
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<div class="highlight"><pre><span></span><code><span class="c1"># Load the EasyBuild-user module (central installations will not work at all</span>
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<span class="c1"># using job submission)</span>
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module<span class="w"> </span>load<span class="w"> </span>LUMI/21.12
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module<span class="w"> </span>load<span class="w"> </span>LUMI/24.03
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module<span class="w"> </span>load<span class="w"> </span>partition/C
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module<span class="w"> </span>load<span class="w"> </span>EasyBuild-user
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@@ -5035,6 +5035,12 @@ <h3 id="inspecting-the-submitted-jobs">Inspecting the submitted jobs<a class="he
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<p>Note that 3 jobs can not be started yet, because those installations require on one or more
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missing dependencies. As soon as the jobs for those dependencies (successfully) complete,
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these jobs will be able to start.</p>
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<div class="admonition warning">
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<p class="admonition-title">Huge installations</p>
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<p>As the number of jobs a user can have in a partition is limited, really huge software
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installations would fail as EasyBuild would try to submit too many jobs. You would have
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to break up such installations by hand in smaller chunks.</p>
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</div>
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<h3 id="final-result">Final result<a class="headerlink" href="#final-result" title="Permanent link">&para;</a></h3>
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<p>After about 20 minutes, AUGUSTUS and all missing dependencies should be installed:</p>
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<div class="highlight"><pre><span></span><code>$ ls -lrt $HOME/EasyBuild/modules/.../*.lua | tail -11
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<span class="md-icon" title="Last update">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M21 13.1c-.1 0-.3.1-.4.2l-1 1 2.1 2.1 1-1c.2-.2.2-.6 0-.8l-1.3-1.3c-.1-.1-.2-.2-.4-.2m-1.9 1.8-6.1 6V23h2.1l6.1-6.1zM12.5 7v5.2l4 2.4-1 1L11 13V7zM11 21.9c-5.1-.5-9-4.8-9-9.9C2 6.5 6.5 2 12 2c5.3 0 9.6 4.1 10 9.3-.3-.1-.6-.2-1-.2s-.7.1-1 .2C19.6 7.2 16.2 4 12 4c-4.4 0-8 3.6-8 8 0 4.1 3.1 7.5 7.1 7.9l-.1.2z"/></svg>
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</span>
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<span class="git-revision-date-localized-plugin git-revision-date-localized-plugin-date" title="May 6, 2025 16:08:56">May 6, 2025</span>
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<span class="git-revision-date-localized-plugin git-revision-date-localized-plugin-date" title="May 7, 2025 07:17:53">May 7, 2025</span>
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</span>
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search/search_index.json

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