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‎FFI.html‎

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‎FFI/Pointer.html‎

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‎FFI/Struct.html‎

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‎HTS.html‎

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‎HTS/Bam.html‎

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<a href="#build_index-instance_method" title="#build_index (instance method)">#<strong>build_index</strong>(index_name = nil, min_shift: 0, threads: 2, verbose: true) &#x21d2; Object </a>
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<a href="#build_index-instance_method" title="#build_index (instance method)">#<strong>build_index</strong>(index_name = nil, min_shift: 0, verbose: true) &#x21d2; Object </a>
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#<strong>build_index</strong>(index_name = nil, min_shift: 0, threads: 2, verbose: true) &#x21d2; <tt>Object</tt>
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#<strong>build_index</strong>(index_name = nil, min_shift: 0, verbose: true) &#x21d2; <tt>Object</tt>
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<td>
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<pre class="code"><span class="info file"># File 'lib/hts/bam.rb', line 96</span>
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<span class='kw'>def</span> <span class='id identifier rubyid_build_index'>build_index</span><span class='lparen'>(</span><span class='id identifier rubyid_index_name'>index_name</span> <span class='op'>=</span> <span class='kw'>nil</span><span class='comma'>,</span> <span class='label'>min_shift:</span> <span class='int'>0</span><span class='comma'>,</span> <span class='label'>threads:</span> <span class='int'>2</span><span class='comma'>,</span> <span class='label'>verbose:</span> <span class='kw'>true</span><span class='rparen'>)</span>
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<span class='kw'>def</span> <span class='id identifier rubyid_build_index'>build_index</span><span class='lparen'>(</span><span class='id identifier rubyid_index_name'>index_name</span> <span class='op'>=</span> <span class='kw'>nil</span><span class='comma'>,</span> <span class='label'>min_shift:</span> <span class='int'>0</span><span class='comma'>,</span> <span class='label'>verbose:</span> <span class='kw'>true</span><span class='rparen'>)</span>
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<span class='id identifier rubyid_check_closed'>check_closed</span>
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<span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_class'>class</span><span class='period'>.</span><span class='id identifier rubyid_build_index'>build_index</span><span class='lparen'>(</span><span class='ivar'>@file_name</span><span class='comma'>,</span> <span class='id identifier rubyid_index_name'>index_name</span><span class='comma'>,</span> <span class='id identifier rubyid_min_shift'>min_shift</span><span class='comma'>,</span> <span class='ivar'>@nthreads</span> <span class='op'>||</span> <span class='id identifier rubyid_threads'>threads</span><span class='comma'>,</span> <span class='id identifier rubyid_verbose'>verbose</span><span class='rparen'>)</span>
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<span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_class'>class</span><span class='period'>.</span><span class='id identifier rubyid_build_index'>build_index</span><span class='lparen'>(</span><span class='ivar'>@file_name</span><span class='comma'>,</span> <span class='id identifier rubyid_index_name'>index_name</span><span class='comma'>,</span> <span class='id identifier rubyid_min_shift'>min_shift</span><span class='comma'>,</span> <span class='ivar'>@nthreads</span> <span class='op'>||</span> <span class='int'>0</span><span class='comma'>,</span> <span class='id identifier rubyid_verbose'>verbose</span><span class='rparen'>)</span>
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<span class='kw'>self</span> <span class='comment'># for method chaining
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</span><span class='kw'>end</span></pre>
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‎HTS/Bam/Aux.html‎

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‎HTS/Bam/BaseMod.html‎

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‎HTS/Bam/BaseMod/Modification.html‎

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‎HTS/Bam/BaseMod/NotParsedError.html‎

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‎HTS/Bam/BaseMod/Position.html‎

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