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rb_parametrized_function.C
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861 lines (718 loc) · 36.5 KB
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// rbOOmit: An implementation of the Certified Reduced Basis method.
// Copyright (C) 2009, 2010 David J. Knezevic
// This file is part of rbOOmit.
// rbOOmit is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
// rbOOmit is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
// libmesh includes
#include "libmesh/rb_parametrized_function.h"
#include "libmesh/int_range.h"
#include "libmesh/point.h"
#include "libmesh/libmesh_logging.h"
#include "libmesh/utility.h"
#include "libmesh/rb_parameters.h"
#include "libmesh/system.h"
#include "libmesh/elem.h"
#include "libmesh/fem_context.h"
namespace libMesh
{
RBParametrizedFunction::RBParametrizedFunction()
:
requires_xyz_perturbations(false),
is_lookup_table(false),
fd_delta(1.e-6),
_is_nodal_boundary(false)
{}
RBParametrizedFunction::~RBParametrizedFunction() = default;
Number
RBParametrizedFunction::evaluate_comp(const RBParameters & mu,
unsigned int comp,
const Point & xyz,
dof_id_type elem_id,
unsigned int qp,
subdomain_id_type subdomain_id,
const std::vector<Point> & xyz_perturb,
const std::vector<Real> & phi_i_qp)
{
std::vector<Number> values = evaluate(mu, xyz, elem_id, qp, subdomain_id, xyz_perturb, phi_i_qp);
libmesh_error_msg_if(comp >= values.size(), "Error: Invalid value of comp");
return values[comp];
}
Number
RBParametrizedFunction::side_evaluate_comp(const RBParameters & mu,
unsigned int comp,
const Point & xyz,
dof_id_type elem_id,
unsigned int side_index,
unsigned int qp,
subdomain_id_type subdomain_id,
boundary_id_type boundary_id,
const std::vector<Point> & xyz_perturb,
const std::vector<Real> & phi_i_qp)
{
std::vector<Number> values = side_evaluate(mu, xyz, elem_id, side_index, qp, subdomain_id, boundary_id, xyz_perturb, phi_i_qp);
libmesh_error_msg_if(comp >= values.size(), "Error: Invalid value of comp");
return values[comp];
}
Number
RBParametrizedFunction::node_evaluate_comp(const RBParameters & mu,
unsigned int comp,
const Point & xyz,
dof_id_type node_id,
boundary_id_type boundary_id)
{
std::vector<Number> values = node_evaluate(mu, xyz, node_id, boundary_id);
libmesh_error_msg_if(comp >= values.size(), "Error: Invalid value of comp");
return values[comp];
}
std::vector<Number>
RBParametrizedFunction::evaluate(const RBParameters & /*mu*/,
const Point & /*xyz*/,
dof_id_type /*elem_id*/,
unsigned int /*qp*/,
subdomain_id_type /*subdomain_id*/,
const std::vector<Point> & /*xyz_perturb*/,
const std::vector<Real> & /*phi_i_qp*/)
{
// This method should be overridden in subclasses, so we just give a not implemented error message here
libmesh_not_implemented();
return std::vector<Number>();
}
std::vector<Number>
RBParametrizedFunction::side_evaluate(const RBParameters & /*mu*/,
const Point & /*xyz*/,
dof_id_type /*elem_id*/,
unsigned int /*side_index*/,
unsigned int /*qp*/,
subdomain_id_type /*subdomain_id*/,
boundary_id_type /*boundary_id*/,
const std::vector<Point> & /*xyz_perturb*/,
const std::vector<Real> & /*phi_i_qp*/)
{
// This method should be overridden in subclasses, so we just give a not implemented error message here
libmesh_not_implemented();
return std::vector<Number>();
}
std::vector<Number>
RBParametrizedFunction::node_evaluate(const RBParameters & /*mu*/,
const Point & /*xyz*/,
dof_id_type /*node_id*/,
boundary_id_type /*boundary_id*/)
{
// This method should be overridden in subclasses, so we just give a not implemented error message here
libmesh_not_implemented();
return std::vector<Number>();
}
void RBParametrizedFunction::vectorized_evaluate(const std::vector<RBParameters> & mus,
const std::vector<Point> & all_xyz,
const std::vector<dof_id_type> & elem_ids,
const std::vector<unsigned int> & qps,
const std::vector<subdomain_id_type> & sbd_ids,
const std::vector<std::vector<Point>> & all_xyz_perturb,
const std::vector<std::vector<Real>> & phi_i_qp,
std::vector<std::vector<std::vector<Number>>> & output)
{
LOG_SCOPE("vectorized_evaluate()", "RBParametrizedFunction");
output.clear();
unsigned int n_points = all_xyz.size();
libmesh_error_msg_if(sbd_ids.size() != n_points, "Error: invalid vector sizes");
libmesh_error_msg_if(requires_xyz_perturbations && (all_xyz_perturb.size() != n_points), "Error: invalid vector sizes");
// Dummy vector to be used when xyz perturbations are not required
std::vector<Point> empty_perturbs;
// The number of components returned by this RBParametrizedFunction
auto n_components = this->get_n_components();
// We first loop over all mus and all n_points, calling evaluate()
// for each and storing the results. It is easier to first
// pre-compute all the values before filling output, since, in the
// case of multi-step RBParameters, the ordering of the loops is a
// bit complicated otherwise.
std::vector<std::vector<std::vector<Number>>> all_evals(mus.size());
for (auto mu_index : index_range(mus))
{
// Allocate enough space to store all points for the current mu
all_evals[mu_index].resize(n_points);
for (auto point_index : index_range(all_evals[mu_index]))
{
// Evaluate all steps for the current mu at the current interpolation point
all_evals[mu_index][point_index] =
this->evaluate(mus[mu_index],
all_xyz[point_index],
elem_ids[point_index],
qps[point_index],
sbd_ids[point_index],
requires_xyz_perturbations ? all_xyz_perturb[point_index] : empty_perturbs,
phi_i_qp[point_index]);
// The vector returned by evaluate() should contain:
// n_components * mus[mu_index].n_steps()
// entries. That is, for multi-step RBParameters objects,
// the vector will be packed with entries as follows:
// [step0_component0, step0_component1, ..., step0_componentN,
// step1_component0, step1_component1, ..., step1_componentN,
// ...
// stepM_component0, stepM_component1, ..., stepM_componentN]
auto n_steps = mus[mu_index].n_steps();
auto received_data = all_evals[mu_index][point_index].size();
libmesh_error_msg_if(received_data != n_components * n_steps,
"Recieved " << received_data <<
" evaluated values but expected to receive " << n_components * n_steps);
}
}
// TODO: move this code for computing the total number of "steps"
// represented by a std::vector of RBParameters objects to a helper
// function.
unsigned int output_size = 0;
for (const auto & mu : mus)
output_size += mu.n_steps();
output.resize(output_size);
// We use traditional for-loops here (rather than range-based) so that we can declare and
// increment multiple loop counters all within the local scope of the for-loop.
for (auto [mu_index, output_index] = std::make_tuple(0u, 0u); mu_index < mus.size(); ++mu_index)
{
auto n_steps = mus[mu_index].n_steps();
for (auto mu_step = 0u; mu_step < n_steps; ++mu_step, ++output_index)
{
output[output_index].resize(n_points);
for (auto point_index : make_range(n_points))
{
output[output_index][point_index].resize(n_components);
for (auto comp : make_range(n_components))
output[output_index][point_index][comp] = all_evals[mu_index][point_index][n_components*mu_step + comp];
}
}
}
}
void RBParametrizedFunction::side_vectorized_evaluate(const std::vector<RBParameters> & mus,
const std::vector<Point> & all_xyz,
const std::vector<dof_id_type> & elem_ids,
const std::vector<unsigned int> & side_indices,
const std::vector<unsigned int> & qps,
const std::vector<subdomain_id_type> & sbd_ids,
const std::vector<boundary_id_type> & boundary_ids,
const std::vector<std::vector<Point>> & all_xyz_perturb,
const std::vector<std::vector<Real>> & phi_i_qp,
std::vector<std::vector<std::vector<Number>>> & output)
{
LOG_SCOPE("side_vectorized_evaluate()", "RBParametrizedFunction");
output.clear();
unsigned int n_points = all_xyz.size();
libmesh_error_msg_if(sbd_ids.size() != n_points, "Error: invalid vector sizes");
libmesh_error_msg_if(requires_xyz_perturbations && (all_xyz_perturb.size() != n_points), "Error: invalid vector sizes");
// Dummy vector to be used when xyz perturbations are not required
std::vector<Point> empty_perturbs;
// The number of components returned by this RBParametrizedFunction
auto n_components = this->get_n_components();
// We first loop over all mus and all n_points, calling side_evaluate()
// for each and storing the results. It is easier to first
// pre-compute all the values before filling output, since, in the
// case of multi-step RBParameters, the ordering of the loops is a
// bit complicated otherwise.
std::vector<std::vector<std::vector<Number>>> all_evals(mus.size());
for (auto mu_index : index_range(mus))
{
// Allocate enough space to store all points for the current mu
all_evals[mu_index].resize(n_points);
for (auto point_index : index_range(all_evals[mu_index]))
{
// Evaluate all steps for the current mu at the current interpolation point
all_evals[mu_index][point_index] =
this->side_evaluate(mus[mu_index],
all_xyz[point_index],
elem_ids[point_index],
side_indices[point_index],
qps[point_index],
sbd_ids[point_index],
boundary_ids[point_index],
requires_xyz_perturbations ? all_xyz_perturb[point_index] : empty_perturbs,
phi_i_qp[point_index]);
// The vector returned by side_evaluate() should contain:
// n_components * mus[mu_index].n_steps()
// entries. That is, for multi-step RBParameters objects,
// the vector will be packed with entries as follows:
// [step0_component0, step0_component1, ..., step0_componentN,
// step1_component0, step1_component1, ..., step1_componentN,
// ...
// stepM_component0, stepM_component1, ..., stepM_componentN]
auto n_steps = mus[mu_index].n_steps();
auto received_data = all_evals[mu_index][point_index].size();
libmesh_error_msg_if(received_data != n_components * n_steps,
"Recieved " << received_data <<
" evaluated values but expected to receive " << n_components * n_steps);
}
}
// TODO: move this code for computing the total number of "steps"
// represented by a std::vector of RBParameters objects to a helper
// function.
unsigned int output_size = 0;
for (const auto & mu : mus)
output_size += mu.n_steps();
output.resize(output_size);
// We use traditional for-loops here (rather than range-based) so that we can declare and
// increment multiple loop counters all within the local scope of the for-loop.
for (auto [mu_index, output_index] = std::make_tuple(0u, 0u); mu_index < mus.size(); ++mu_index)
{
auto n_steps = mus[mu_index].n_steps();
for (auto mu_step = 0u; mu_step < n_steps; ++mu_step, ++output_index)
{
output[output_index].resize(n_points);
for (auto point_index : make_range(n_points))
{
output[output_index][point_index].resize(n_components);
for (auto comp : make_range(n_components))
output[output_index][point_index][comp] = all_evals[mu_index][point_index][n_components*mu_step + comp];
}
}
}
}
void RBParametrizedFunction::node_vectorized_evaluate(const std::vector<RBParameters> & mus,
const std::vector<Point> & all_xyz,
const std::vector<dof_id_type> & node_ids,
const std::vector<boundary_id_type> & boundary_ids,
std::vector<std::vector<std::vector<Number>>> & output)
{
LOG_SCOPE("node_vectorized_evaluate()", "RBParametrizedFunction");
output.clear();
unsigned int n_points = all_xyz.size();
// The number of components returned by this RBParametrizedFunction
auto n_components = this->get_n_components();
// We first loop over all mus and all n_points, calling node_evaluate()
// for each and storing the results. It is easier to first
// pre-compute all the values before filling output, since, in the
// case of multi-step RBParameters, the ordering of the loops is a
// bit complicated otherwise.
std::vector<std::vector<std::vector<Number>>> all_evals(mus.size());
for (auto mu_index : index_range(mus))
{
// Allocate enough space to store all points for the current mu
all_evals[mu_index].resize(n_points);
for (auto point_index : index_range(all_evals[mu_index]))
{
// Evaluate all steps for the current mu at the current interpolation point
all_evals[mu_index][point_index] =
this->node_evaluate(mus[mu_index],
all_xyz[point_index],
node_ids[point_index],
boundary_ids[point_index]);
// The vector returned by node_evaluate() should contain:
// n_components * mus[mu_index].n_steps()
// entries. That is, for multi-step RBParameters objects,
// the vector will be packed with entries as follows:
// [step0_component0, step0_component1, ..., step0_componentN,
// step1_component0, step1_component1, ..., step1_componentN,
// ...
// stepM_component0, stepM_component1, ..., stepM_componentN]
auto n_steps = mus[mu_index].n_steps();
auto received_data = all_evals[mu_index][point_index].size();
libmesh_error_msg_if(received_data != n_components * n_steps,
"Recieved " << received_data <<
" evaluated values but expected to receive " << n_components * n_steps);
}
}
// TODO: move this code for computing the total number of "steps"
// represented by a std::vector of RBParameters objects to a helper
// function.
unsigned int output_size = 0;
for (const auto & mu : mus)
output_size += mu.n_steps();
output.resize(output_size);
// We use traditional for-loops here (rather than range-based) so that we can declare and
// increment multiple loop counters all within the local scope of the for-loop.
for (auto [mu_index, output_index] = std::make_tuple(0u, 0u); mu_index < mus.size(); ++mu_index)
{
auto n_steps = mus[mu_index].n_steps();
for (auto mu_step = 0u; mu_step < n_steps; ++mu_step, ++output_index)
{
output[output_index].resize(n_points);
for (auto point_index : make_range(n_points))
{
output[output_index][point_index].resize(n_components);
for (auto comp : make_range(n_components))
output[output_index][point_index][comp] = all_evals[mu_index][point_index][n_components*mu_step + comp];
}
}
}
}
void RBParametrizedFunction::preevaluate_parametrized_function_on_mesh(const RBParameters & mu,
const std::unordered_map<dof_id_type, std::vector<Point>> & all_xyz,
const std::unordered_map<dof_id_type, subdomain_id_type> & sbd_ids,
const std::unordered_map<dof_id_type, std::vector<std::vector<Point>> > & all_xyz_perturb,
const System & sys)
{
mesh_to_preevaluated_values_map.clear();
unsigned int n_points = 0;
for (const auto & xyz_pair : all_xyz)
{
const std::vector<Point> & xyz_vec = xyz_pair.second;
n_points += xyz_vec.size();
}
std::vector<Point> all_xyz_vec(n_points);
std::vector<dof_id_type> elem_ids_vec(n_points);
std::vector<unsigned int> qps_vec(n_points);
std::vector<subdomain_id_type> sbd_ids_vec(n_points);
std::vector<std::vector<Point>> all_xyz_perturb_vec(n_points);
std::vector<std::vector<Real>> phi_i_qp_vec(n_points);
// Empty vector to be used when xyz perturbations are not required
std::vector<Point> empty_perturbs;
// In order to compute phi_i_qp, we initialize a FEMContext
FEMContext con(sys);
for (auto dim : con.elem_dimensions())
{
auto fe = con.get_element_fe(/*var=*/0, dim);
fe->get_phi();
}
unsigned int counter = 0;
for (const auto & [elem_id, xyz_vec] : all_xyz)
{
subdomain_id_type subdomain_id = libmesh_map_find(sbd_ids, elem_id);
// The amount of data to be stored for each component
auto n_qp = xyz_vec.size();
mesh_to_preevaluated_values_map[elem_id].resize(n_qp);
// Also initialize phi in order to compute phi_i_qp
const Elem & elem_ref = sys.get_mesh().elem_ref(elem_id);
con.pre_fe_reinit(sys, &elem_ref);
auto elem_fe = con.get_element_fe(/*var=*/0, elem_ref.dim());
const std::vector<std::vector<Real>> & phi = elem_fe->get_phi();
elem_fe->reinit(&elem_ref);
for (auto qp : index_range(xyz_vec))
{
mesh_to_preevaluated_values_map[elem_id][qp] = counter;
all_xyz_vec[counter] = xyz_vec[qp];
elem_ids_vec[counter] = elem_id;
qps_vec[counter] = qp;
sbd_ids_vec[counter] = subdomain_id;
phi_i_qp_vec[counter].resize(phi.size());
for(auto i : index_range(phi))
phi_i_qp_vec[counter][i] = phi[i][qp];
if (requires_xyz_perturbations)
{
const auto & qps_and_perturbs =
libmesh_map_find(all_xyz_perturb, elem_id);
libmesh_error_msg_if(qp >= qps_and_perturbs.size(), "Error: Invalid qp");
all_xyz_perturb_vec[counter] = qps_and_perturbs[qp];
}
else
{
all_xyz_perturb_vec[counter] = empty_perturbs;
}
counter++;
}
}
libmesh_error_msg_if(counter == 0, "Parametrized function on mesh has no values");
std::vector<RBParameters> mus {mu};
vectorized_evaluate(mus,
all_xyz_vec,
elem_ids_vec,
qps_vec,
sbd_ids_vec,
all_xyz_perturb_vec,
phi_i_qp_vec,
preevaluated_values);
preevaluate_parametrized_function_cleanup();
}
void RBParametrizedFunction::preevaluate_parametrized_function_on_mesh_sides(const RBParameters & mu,
const std::map<std::pair<dof_id_type,unsigned int>, std::vector<Point>> & side_all_xyz,
const std::map<std::pair<dof_id_type,unsigned int>, subdomain_id_type> & sbd_ids,
const std::map<std::pair<dof_id_type,unsigned int>, boundary_id_type> & side_boundary_ids,
const std::map<std::pair<dof_id_type,unsigned int>, unsigned int> & side_types,
const std::map<std::pair<dof_id_type,unsigned int>, std::vector<std::vector<Point>> > & side_all_xyz_perturb,
const System & sys)
{
mesh_to_preevaluated_side_values_map.clear();
unsigned int n_points = 0;
for (const auto & xyz_pair : side_all_xyz)
{
const std::vector<Point> & xyz_vec = xyz_pair.second;
n_points += xyz_vec.size();
}
std::vector<Point> all_xyz_vec(n_points);
std::vector<dof_id_type> elem_ids_vec(n_points);
std::vector<unsigned int> side_indices_vec(n_points);
std::vector<unsigned int> qps_vec(n_points);
std::vector<subdomain_id_type> sbd_ids_vec(n_points);
std::vector<boundary_id_type> boundary_ids_vec(n_points);
std::vector<std::vector<Point>> all_xyz_perturb_vec(n_points);
std::vector<std::vector<Real>> phi_i_qp_vec(n_points);
// Empty vector to be used when xyz perturbations are not required
std::vector<Point> empty_perturbs;
// In order to compute phi_i_qp, we initialize a FEMContext
FEMContext con(sys);
for (auto dim : con.elem_dimensions())
{
auto fe = con.get_element_fe(/*var=*/0, dim);
fe->get_phi();
auto side_fe = con.get_side_fe(/*var=*/0, dim);
side_fe->get_phi();
}
unsigned int counter = 0;
for (const auto & xyz_pair : side_all_xyz)
{
auto elem_side_pair = xyz_pair.first;
dof_id_type elem_id = elem_side_pair.first;
unsigned int side_index = elem_side_pair.second;
const std::vector<Point> & xyz_vec = xyz_pair.second;
subdomain_id_type subdomain_id = libmesh_map_find(sbd_ids, elem_side_pair);
boundary_id_type boundary_id = libmesh_map_find(side_boundary_ids, elem_side_pair);
unsigned int side_type = libmesh_map_find(side_types, elem_side_pair);
// The amount of data to be stored for each component
auto n_qp = xyz_vec.size();
mesh_to_preevaluated_side_values_map[elem_side_pair].resize(n_qp);
const Elem & elem_ref = sys.get_mesh().elem_ref(elem_id);
con.pre_fe_reinit(sys, &elem_ref);
// side_type == 0 --> standard side
// side_type == 1 --> shellface
if (side_type == 0)
{
std::unique_ptr<const Elem> elem_side;
elem_ref.build_side_ptr(elem_side, side_index);
auto side_fe = con.get_side_fe(/*var=*/0, elem_ref.dim());
side_fe->reinit(&elem_ref, side_index);
const std::vector<std::vector<Real>> & phi = side_fe->get_phi();
for (auto qp : index_range(xyz_vec))
{
mesh_to_preevaluated_side_values_map[elem_side_pair][qp] = counter;
all_xyz_vec[counter] = xyz_vec[qp];
elem_ids_vec[counter] = elem_side_pair.first;
side_indices_vec[counter] = elem_side_pair.second;
qps_vec[counter] = qp;
sbd_ids_vec[counter] = subdomain_id;
boundary_ids_vec[counter] = boundary_id;
phi_i_qp_vec[counter].resize(phi.size());
for(auto i : index_range(phi))
phi_i_qp_vec[counter][i] = phi[i][qp];
if (requires_xyz_perturbations)
{
const auto & qps_and_perturbs =
libmesh_map_find(side_all_xyz_perturb, elem_side_pair);
libmesh_error_msg_if(qp >= qps_and_perturbs.size(), "Error: Invalid qp");
all_xyz_perturb_vec[counter] = qps_and_perturbs[qp];
}
else
{
all_xyz_perturb_vec[counter] = empty_perturbs;
}
counter++;
}
}
else if (side_type == 1)
{
auto elem_fe = con.get_element_fe(/*var=*/0, elem_ref.dim());
const std::vector<std::vector<Real>> & phi = elem_fe->get_phi();
elem_fe->reinit(&elem_ref);
for (auto qp : index_range(xyz_vec))
{
mesh_to_preevaluated_side_values_map[elem_side_pair][qp] = counter;
all_xyz_vec[counter] = xyz_vec[qp];
elem_ids_vec[counter] = elem_side_pair.first;
side_indices_vec[counter] = elem_side_pair.second;
qps_vec[counter] = qp;
sbd_ids_vec[counter] = subdomain_id;
boundary_ids_vec[counter] = boundary_id;
phi_i_qp_vec[counter].resize(phi.size());
for(auto i : index_range(phi))
phi_i_qp_vec[counter][i] = phi[i][qp];
if (requires_xyz_perturbations)
{
const auto & qps_and_perturbs =
libmesh_map_find(side_all_xyz_perturb, elem_side_pair);
libmesh_error_msg_if(qp >= qps_and_perturbs.size(), "Error: Invalid qp");
all_xyz_perturb_vec[counter] = qps_and_perturbs[qp];
}
else
{
all_xyz_perturb_vec[counter] = empty_perturbs;
}
counter++;
}
}
else
libmesh_error_msg ("Unrecognized side_type: " << side_type);
}
libmesh_error_msg_if(counter == 0, "Parametrized function on mesh sides has no values");
std::vector<RBParameters> mus {mu};
side_vectorized_evaluate(mus,
all_xyz_vec,
elem_ids_vec,
side_indices_vec,
qps_vec,
sbd_ids_vec,
boundary_ids_vec,
all_xyz_perturb_vec,
phi_i_qp_vec,
preevaluated_values);
preevaluate_parametrized_function_cleanup();
}
void RBParametrizedFunction::preevaluate_parametrized_function_on_mesh_nodes(const RBParameters & mu,
const std::unordered_map<dof_id_type, Point> & all_xyz,
const std::unordered_map<dof_id_type, boundary_id_type> & node_boundary_ids,
const System & /*sys*/)
{
mesh_to_preevaluated_node_values_map.clear();
unsigned int n_points = all_xyz.size();
std::vector<Point> all_xyz_vec(n_points);
std::vector<dof_id_type> node_ids_vec(n_points);
std::vector<boundary_id_type> boundary_ids_vec(n_points);
// Empty vector to be used when xyz perturbations are not required
std::vector<Point> empty_perturbs;
unsigned int counter = 0;
for (const auto & [node_id, p] : all_xyz)
{
boundary_id_type boundary_id = libmesh_map_find(node_boundary_ids, node_id);
mesh_to_preevaluated_node_values_map[node_id] = counter;
all_xyz_vec[counter] = p;
node_ids_vec[counter] = node_id;
boundary_ids_vec[counter] = boundary_id;
counter++;
}
libmesh_error_msg_if(counter == 0, "Parametrized function on mesh nodes has no values");
std::vector<RBParameters> mus {mu};
node_vectorized_evaluate(mus,
all_xyz_vec,
node_ids_vec,
boundary_ids_vec,
preevaluated_values);
preevaluate_parametrized_function_cleanup();
}
Number RBParametrizedFunction::lookup_preevaluated_value_on_mesh(unsigned int comp,
dof_id_type elem_id,
unsigned int qp) const
{
const std::vector<unsigned int> & indices_at_qps =
libmesh_map_find(mesh_to_preevaluated_values_map, elem_id);
libmesh_error_msg_if(qp >= indices_at_qps.size(), "Error: invalid qp");
unsigned int index = indices_at_qps[qp];
libmesh_error_msg_if(preevaluated_values.size() != 1, "Error: we expect only one parameter index");
libmesh_error_msg_if(index >= preevaluated_values[0].size(), "Error: invalid index");
return preevaluated_values[0][index][comp];
}
Number RBParametrizedFunction::lookup_preevaluated_side_value_on_mesh(unsigned int comp,
dof_id_type elem_id,
unsigned int side_index,
unsigned int qp) const
{
const std::vector<unsigned int> & indices_at_qps =
libmesh_map_find(mesh_to_preevaluated_side_values_map, std::make_pair(elem_id,side_index));
libmesh_error_msg_if(qp >= indices_at_qps.size(), "Error: invalid qp");
unsigned int index = indices_at_qps[qp];
libmesh_error_msg_if(preevaluated_values.size() != 1, "Error: we expect only one parameter index");
libmesh_error_msg_if(index >= preevaluated_values[0].size(), "Error: invalid index");
return preevaluated_values[0][index][comp];
}
Number RBParametrizedFunction::lookup_preevaluated_node_value_on_mesh(unsigned int comp,
dof_id_type node_id) const
{
unsigned int index =
libmesh_map_find(mesh_to_preevaluated_node_values_map, node_id);
libmesh_error_msg_if(preevaluated_values.size() != 1, "Error: we expect only one parameter index");
libmesh_error_msg_if(index >= preevaluated_values[0].size(), "Error: invalid index");
return preevaluated_values[0][index][comp];
}
void RBParametrizedFunction::initialize_lookup_table()
{
// No-op by default, override in subclasses as needed
}
Number RBParametrizedFunction::get_parameter_independent_data(const std::string & property_name,
subdomain_id_type sbd_id) const
{
return libmesh_map_find(libmesh_map_find(_parameter_independent_data, property_name), sbd_id);
}
std::vector<std::vector<Number>> RBParametrizedFunction::evaluate_at_observation_points(const RBParameters & mu,
const std::vector<Point> & observation_points,
const std::vector<dof_id_type> & elem_ids,
const std::vector<subdomain_id_type> & sbd_ids,
const System & sys)
{
unsigned int n_points = observation_points.size();
if (n_points == 0)
return std::vector<std::vector<Number>>();
const std::vector<unsigned int> qps_vec(n_points);
std::vector<std::vector<Real>> phi_i_qp_vec(n_points);
// In order to compute phi_i_qp, we initialize a FEMContext
FEMContext con(sys);
for (auto dim : con.elem_dimensions())
{
auto fe = con.get_element_fe(/*var=*/0, dim);
fe->get_phi();
}
for (unsigned int obs_pt_idx : index_range(observation_points))
{
const Point & obs_pt = observation_points[obs_pt_idx];
dof_id_type elem_id = elem_ids[obs_pt_idx];
// Also initialize phi in order to compute phi_i_qp
const Elem & elem_ref = sys.get_mesh().elem_ref(elem_id);
auto elem_fe = con.get_element_fe(/*var=*/0, elem_ref.dim());
const std::vector<std::vector<Real>> & phi = elem_fe->get_phi();
Point obs_pt_ref_coords =
FEMap::inverse_map(
elem_ref.dim(),
&elem_ref,
obs_pt,
/*tolerance*/ TOLERANCE,
/*secure*/ true,
/*extra_checks*/ false);
std::vector<Point> obs_pt_ref_coords_vec = {obs_pt_ref_coords};
con.pre_fe_reinit(sys, &elem_ref);
con.get_element_fe(/*var*/ 0, elem_ref.dim())->reinit(&elem_ref, &obs_pt_ref_coords_vec);
phi_i_qp_vec[obs_pt_idx].resize(phi.size());
for(auto i : index_range(phi))
phi_i_qp_vec[obs_pt_idx][i] = phi[i][/*qp*/ 0];
}
std::vector<std::vector<std::vector<Number>>> obs_pt_values;
vectorized_evaluate({mu},
observation_points,
elem_ids,
qps_vec,
sbd_ids,
/*all_xyz_perturb_vec*/ {},
phi_i_qp_vec,
obs_pt_values);
return obs_pt_values[0];
}
void RBParametrizedFunction::get_spatial_indices(std::vector<std::vector<unsigned int>> & /*spatial_indices*/,
const std::vector<dof_id_type> & /*elem_ids*/,
const std::vector<unsigned int> & /*side_indices*/,
const std::vector<dof_id_type> & /*node_ids*/,
const std::vector<unsigned int> & /*qps*/,
const std::vector<subdomain_id_type> & /*sbd_ids*/,
const std::vector<boundary_id_type> & /*boundary_ids*/)
{
// No-op by default
}
void RBParametrizedFunction::initialize_spatial_indices(const std::vector<std::vector<unsigned int>> & /*spatial_indices*/,
const std::vector<dof_id_type> & /*elem_ids*/,
const std::vector<unsigned int> & /*side_indices*/,
const std::vector<dof_id_type> & /*node_ids*/,
const std::vector<unsigned int> & /*qps*/,
const std::vector<subdomain_id_type> & /*sbd_ids*/,
const std::vector<boundary_id_type> & /*boundary_ids*/)
{
// No-op by default
}
void RBParametrizedFunction::preevaluate_parametrized_function_cleanup()
{
// No-op by default
}
const std::set<boundary_id_type> & RBParametrizedFunction::get_parametrized_function_boundary_ids() const
{
return _parametrized_function_boundary_ids;
}
void RBParametrizedFunction::set_parametrized_function_boundary_ids(const std::set<boundary_id_type> & boundary_ids, bool is_nodal_boundary)
{
_parametrized_function_boundary_ids = boundary_ids;
_is_nodal_boundary = is_nodal_boundary;
}
bool RBParametrizedFunction::on_mesh_sides() const
{
return !get_parametrized_function_boundary_ids().empty() && !_is_nodal_boundary;
}
bool RBParametrizedFunction::on_mesh_nodes() const
{
return !get_parametrized_function_boundary_ids().empty() && _is_nodal_boundary;
}
}