build based on d0f786c

Author: Documenter.jl

julia-docs/dev/docstrings.html

@@ -258,6 +258,7 @@ <h2 class="anchored" data-anchor-id="union---b2cfd89fb0d1b9c6"><code data-shortc
 <li><p><code>filamentmechparams::Vector{MEDYAN.FilamentMechParams}</code>: The filament mechanical parameters, indexed by filament type id</p></li>
 <li><p><code>func_membranespeciespotentialenergy::Any</code>: Membrane species potential energy function. See docs on default function for more info.</p></li>
 <li><p><code>external_energy_forces!::Any</code>: External energy/force expressions. This should be a mutating function taking a <code>(fc::MEDYAN.ForceContext, vectorized_x)</code>, which adds to <code>fc.forces, fc.energies, and fc.energy</code>. The energy and force must be consistent, and this is not checked. This can be used as ad-hoc solutions to experiment with uncommon forces, such as specifically designed attachments, etc. If this variable is used often, consider moving it into MEDYAN.</p></li>
+<li><p><code>set_gamma!::Any</code>: User-supplied callback to customize per-DOF friction coefficients (γ, pN·s/nm) before <code>drag_back_k</code> and <code>drag_rand_force</code> are derived. Signature: <code>(fc::MEDYAN.ForceContext, c::MEDYAN.Context) -&gt; nothing</code> Called after the default γ values are populated in <code>fc.gamma</code>, so it may freely mutate <code>fc.gamma</code> (e.g.&nbsp;to assign drag to membrane vertices, or override specific beads). Defaults to <code>Returns(nothing)</code> (no-op).</p></li>
 <li><p><code>chemboundary::MEDYAN.Boundary</code>: chemical boundary, updates compartment volumes and diffusion rates</p></li>
 <li><p><code>chem_boundary_oversampling_factor::Int64</code>: Oversampling factor for chem boundary TSDF computation. Default is 4.</p></li>
 <li><p><code>chem_boundary_tsdf_max_distance::Float64</code>: Maximum distance for TSDF truncation (nm). Actual max is max(this, 2.5*grid_spacing). Default is 312.5 nm.</p></li>

julia-docs/dev/docstrings/medyan.context-736368ed32b08894.html

@@ -304,6 +304,7 @@ <h2 class="anchored" data-anchor-id="medyan.context-736368ed32b08894"><a href=".
 <li><p><code>filamentmechparams::Vector{MEDYAN.FilamentMechParams}</code>: The filament mechanical parameters, indexed by filament type id</p></li>
 <li><p><code>func_membranespeciespotentialenergy::Any</code>: Membrane species potential energy function. See docs on default function for more info.</p></li>
 <li><p><code>external_energy_forces!::Any</code>: External energy/force expressions. This should be a mutating function taking a <code>(fc::MEDYAN.ForceContext, vectorized_x)</code>, which adds to <code>fc.forces, fc.energies, and fc.energy</code>. The energy and force must be consistent, and this is not checked. This can be used as ad-hoc solutions to experiment with uncommon forces, such as specifically designed attachments, etc. If this variable is used often, consider moving it into MEDYAN.</p></li>
+<li><p><code>set_gamma!::Any</code>: User-supplied callback to customize per-DOF friction coefficients (γ, pN·s/nm) before <code>drag_back_k</code> and <code>drag_rand_force</code> are derived. Signature: <code>(fc::MEDYAN.ForceContext, c::MEDYAN.Context) -&gt; nothing</code> Called after the default γ values are populated in <code>fc.gamma</code>, so it may freely mutate <code>fc.gamma</code> (e.g.&nbsp;to assign drag to membrane vertices, or override specific beads). Defaults to <code>Returns(nothing)</code> (no-op).</p></li>
 <li><p><code>chemboundary::MEDYAN.Boundary</code>: chemical boundary, updates compartment volumes and diffusion rates</p></li>
 <li><p><code>chem_boundary_oversampling_factor::Int64</code>: Oversampling factor for chem boundary TSDF computation. Default is 4.</p></li>
 <li><p><code>chem_boundary_tsdf_max_distance::Float64</code>: Maximum distance for TSDF truncation (nm). Actual max is max(this, 2.5*grid_spacing). Default is 312.5 nm.</p></li>

julia-docs/dev/docstrings/src/context.html

@@ -259,7 +259,7 @@ <h2 class="anchored" data-anchor-id="install-julia">Install julia</h2>
   GC: Built with stock GC
 Threads: 1 default, 1 interactive, 1 GC (on 16 virtual cores)
 Environment:
-  LD_LIBRARY_PATH = /home/gh-actions1/actions-runner3/_work/_tool/julia/1.12.5/x64/bin/../lib/julia:/home/gh-actions1/actions-runner3/_work/_tool/julia/1.12.5/x64/bin/../lib
+  LD_LIBRARY_PATH = /home/gh-actions1/actions-runner6/_work/_tool/julia/1.12.5/x64/bin/../lib/julia:/home/gh-actions1/actions-runner6/_work/_tool/julia/1.12.5/x64/bin/../lib
   JULIA_PROJECT = @.
   JULIA_LOAD_PATH = @:@stdlib</code></pre>
 </div>