Add CI pipeline

Author: JMorado

.github/workflows/ci.yml

@@ -0,0 +1,81 @@
+name: CI
+
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+defaults:
+  run:
+    shell: bash -l {0} 
+
+jobs:
+  lint:
+    name: Lint (ruff)
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install ruff
+        run: pip install ruff
+
+      - name: Run ruff
+        run: ruff check .
+
+  typecheck:
+    name: Type-check (mypy)
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install package + mypy
+        run: pip install mypy numpy h5py && pip install -e .
+
+      - name: Run mypy
+        run: mypy pyxdm --ignore-missing-imports
+
+  test:
+    name: Tests (Python ${{ matrix.python-version }})
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.10", "3.11", "3.12"]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up conda (miniforge)
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          miniforge-version: latest
+          python-version: ${{ matrix.python-version }}
+          activate-environment: pyxdm
+          environment-file: environment.yaml
+          auto-activate-base: false
+
+      - name: Install package + test dependencies
+        run: pip install -e ".[test]"
+
+      - name: Run tests with coverage
+        run: pytest
+
+      - name: Upload coverage to Codecov
+        if: matrix.python-version == '3.11'
+        uses: codecov/codecov-action@v4
+        with:
+          files: coverage.xml
+          fail_ci_if_error: false

pyproject.toml

@@ -76,6 +76,26 @@ known-first-party = ["pyxdm"]
 combine-as-imports = true
 force-single-line = false
 
+[tool.pytest.ini_options]
+testpaths = ["pyxdm/tests"]
+addopts = [
+    "--cov=pyxdm",
+    "--cov-report=term-missing",
+    "--cov-report=xml",
+    "-v",
+]
+
+[tool.coverage.run]
+source = ["pyxdm"]
+omit = ["pyxdm/tests/*"]
+
+[tool.coverage.report]
+exclude_lines = [
+    "pragma: no cover",
+    "if TYPE_CHECKING:",
+    "raise NotImplementedError",
+]
+
 [tool.mypy]
 python_version = "3.10"
 warn_return_any = true