updated scib version (#793)

* updated scib version

* Bump scib req

* use neighborhood graph f1

---------

Co-authored-by: Scott Gigante <84813314+scottgigante-immunai@users.noreply.github.com>
Former-commit-id: 32b46e6

Author: danielStrobl

docker/openproblems-r-extras/requirements.txt

@@ -1,4 +1,4 @@
 git+https://github.com/KrishnaswamyLab/harmonic-alignment@v0.1#subdirectory=python
 rpy2<3.4.3
-scib==1.0.5
+scib==1.1.2
 xgboost==1.6.*

docker/openproblems-r-pytorch/requirements.txt

@@ -3,6 +3,6 @@ bbknn==1.5.*
 git+https://github.com/chriscainx/mnnpy@2097dec  # master
 harmony-pytorch==0.1.*
 scanorama==1.7.0
-scib==1.0.5
-scvi-tools~=0.19  # pinned in #313
+scib==1.1.2
+scvi-tools~=0.19
 torch==1.13.*