Set points key in comseg patch generation (#109)

LouisK92 · web-flow · commit 93c2914a1bff · 2025-11-06T22:51:55.000+01:00
diff --git a/src/methods_transcript_assignment/comseg/script.py b/src/methods_transcript_assignment/comseg/script.py
@@ -43,6 +43,7 @@
     "write_cells_centroids": True,
     "patch_width": par["transcript_patch_width"],
     "prior_shapes_key": "segmentation_boundaries",
+    "points_key": par["transcripts_key"],
 }
 
 sopa.make_transcript_patches(**transcript_patch_args)

Original file line number	Diff line number	Diff line change
`@@ -43,6 +43,7 @@`
`43`	`43`	`"write_cells_centroids": True,`
`44`	`44`	`"patch_width": par["transcript_patch_width"],`
`45`	`45`	`"prior_shapes_key": "segmentation_boundaries",`
	`46`	`+ "points_key": par["transcripts_key"],`
`46`	`47`	`}`
`47`	`48`
`48`	`49`	`sopa.make_transcript_patches(**transcript_patch_args)`