task_predict_modality/src/metrics/mse/config.vsh.yaml at 0ae1f75702f838b17be3286e2576180916c246ca · openproblems-bio/task_predict_modality · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
__merge__: ../../api/comp_metric.yaml
name: mse
info:
  metrics:
    - name: rmse
      label: RMSE
      summary: The root mean squared error.
      description: The square root of the mean of the square of all of the error.
      min: 0
      max: "+inf"
      maximize: false
      references:
        doi: 10.5194/gmdd-7-1525-2014
    - name: mae
      label: MAE
      summary: The mean absolute error.
      description: The average difference between the expression values and the predicted expression values.
      min: 0
      max: "+inf"
      maximize: false
      references:
        doi: 10.5194/gmdd-7-1525-2014
resources:
  - type: python_script
    path: script.py
engines:
  - type: docker
    image: openproblems/base_python:1
runners:
  - type: executable
  - type: nextflow
    directives:
      label: [midtime, lowmem, lowcpu]