|
| 1 | +--- |
| 2 | +output: github_document |
| 3 | +always_allow_html: true |
| 4 | +editor_options: |
| 5 | + markdown: |
| 6 | + wrap: 72 |
| 7 | + chunk_output_type: console |
| 8 | +--- |
| 9 | + |
| 10 | +<!-- README.md is generated from README.Rmd. Please edit that file --> |
| 11 | + |
| 12 | +```{r, include = FALSE} |
| 13 | +knitr::opts_chunk$set( |
| 14 | + collapse = TRUE, |
| 15 | + comment = "#>", |
| 16 | + fig.path = "man/figures/README-", |
| 17 | + out.width = "100%", |
| 18 | + message = FALSE, |
| 19 | + warning = FALSE, |
| 20 | + fig.retina = 2, |
| 21 | + fig.align = 'center' |
| 22 | +) |
| 23 | +``` |
| 24 | + |
| 25 | +# Handpump Functionality Verification Survey - Chiradzulu, Malawi 2020 |
| 26 | + |
| 27 | +<!-- badges: start --> |
| 28 | + |
| 29 | +[](https://creativecommons.org/licenses/by/4.0/) |
| 31 | + |
| 32 | +<!-- badges: end --> |
| 33 | + |
| 34 | +This dataset contains detailed field survey records of borehole and |
| 35 | +handpump functionality verification exercises conducted in Chiradzulu |
| 36 | +District, Malawi in February 2020. Data was collected by BASEflow using |
| 37 | +the mWater mobile data collection platform. Each record represents a |
| 38 | +single site visit to a water point, capturing GPS coordinates, technical |
| 39 | +assessments, water availability, environmental conditions, and |
| 40 | +maintenance history. |
| 41 | + |
| 42 | +The dataset includes: |
| 43 | + |
| 44 | +- Identification & Location – Visit date, water point name/type, |
| 45 | + latitude, and longitude. |
| 46 | + |
| 47 | +- Institutional Factors – Availability of government staff, committee |
| 48 | + permission for inspection. |
| 49 | + |
| 50 | +- Functionality & Condition – Operational status, water availability, |
| 51 | + flow rate measurements, strokes to discharge, and mechanical |
| 52 | + condition. |
| 53 | + |
| 54 | +- Environmental Hazards – Presence of latrines, cemeteries, waste, |
| 55 | + rivers, lakes, flood-prone areas, and difficult terrain within 50m. |
| 56 | + |
| 57 | +- Repair & Maintenance History – Borehole age, manufacturer, |
| 58 | + installation details, prior repairs, spare parts required, and |
| 59 | + operational feel. |
| 60 | + |
| 61 | +- Documentation – Photographs of the water point and repair parts. |
| 62 | + |
| 63 | +**Purpose** |
| 64 | + |
| 65 | +The dataset supports rural water supply monitoring, maintenance |
| 66 | +planning, and public health risk assessments, contributing to efforts to |
| 67 | +improve sustainability and reliability of community water points. |
| 68 | + |
| 69 | +**Potential Users** |
| 70 | + |
| 71 | +This dataset can be valuable to: |
| 72 | + |
| 73 | +1. **Local Governments** – For planning maintenance schedules and |
| 74 | + allocating resources to priority water points. |
| 75 | + |
| 76 | +2. **NGOs & Development Partners** – For designing interventions to |
| 77 | + improve rural water supply sustainability. |
| 78 | + |
| 79 | +3. **Researchers & Public Health Experts** – For studying the impact of |
| 80 | + infrastructure condition on water access and health outcomes. |
| 81 | + |
| 82 | +4. **Donors & Funding Agencies** – For monitoring the effectiveness of |
| 83 | + investments in water infrastructure. |
| 84 | + |
| 85 | +5. **Community-Based Organizations** – For advocating improved water |
| 86 | + services and mobilizing community-led repairs. |
| 87 | + |
| 88 | +## Installation |
| 89 | + |
| 90 | +You can install the development version of handpumpstatusdata from |
| 91 | +[GitHub](https://github.com/) with: |
| 92 | + |
| 93 | +``` r |
| 94 | +# install.packages("devtools") |
| 95 | +devtools::install_github("openwashdata/handpumpstatusdata") |
| 96 | +``` |
| 97 | + |
| 98 | +```{r} |
| 99 | +## Run the following code in console if you don't have the packages |
| 100 | +## install.packages(c("dplyr", "knitr", "readr", "stringr", "gt", "kableExtra")) |
| 101 | +library(dplyr) |
| 102 | +library(knitr) |
| 103 | +library(readr) |
| 104 | +library(stringr) |
| 105 | +library(gt) |
| 106 | +library(kableExtra) |
| 107 | +``` |
| 108 | + |
| 109 | +Alternatively, you can download the individual datasets as a CSV or XLSX |
| 110 | +file from the table below. |
| 111 | + |
| 112 | +1. Click Download CSV. A window opens that displays the CSV in your |
| 113 | + browser. |
| 114 | +2. Right-click anywhere inside the window and select "Save Page As...". |
| 115 | +3. Save the file in a folder of your choice. |
| 116 | + |
| 117 | +```{r, echo=FALSE, message=FALSE, warning=FALSE} |
| 118 | +
|
| 119 | +extdata_path <- "https://github.com/openwashdata/handpumpstatusdata/raw/main/inst/extdata/" |
| 120 | +
|
| 121 | +read_csv("data-raw/dictionary.csv") |> |
| 122 | + distinct(file_name) |> |
| 123 | + dplyr::mutate(file_name = str_remove(file_name, ".rda")) |> |
| 124 | + dplyr::rename(dataset = file_name) |> |
| 125 | + mutate( |
| 126 | + CSV = paste0("[Download CSV](", extdata_path, dataset, ".csv)"), |
| 127 | + XLSX = paste0("[Download XLSX](", extdata_path, dataset, ".xlsx)") |
| 128 | + ) |> |
| 129 | + knitr::kable() |
| 130 | +
|
| 131 | +``` |
| 132 | + |
| 133 | +## Data |
| 134 | + |
| 135 | +This dataset contains detailed field survey records of borehole and |
| 136 | +handpump functionality verification exercises conducted in Chiradzulu |
| 137 | +District, Malawi in February 2020. |
| 138 | + |
| 139 | +```{r} |
| 140 | +library(handpumpstatusdata) |
| 141 | +``` |
| 142 | + |
| 143 | +### handpumpstatusdata |
| 144 | + |
| 145 | +The dataset `handpumpstatusdata` has |
| 146 | +`r nrow(handpumpstatusdata)` observations and |
| 147 | +`r ncol(handpumpstatusdata)` variables |
| 148 | + |
| 149 | +```{r} |
| 150 | +handpumpstatusdata |> |
| 151 | + head(3) |> |
| 152 | + gt::gt() |> |
| 153 | + gt::as_raw_html() |
| 154 | +``` |
| 155 | + |
| 156 | +For an overview of the variable names, see the following table. |
| 157 | + |
| 158 | +```{r echo=FALSE, message=FALSE, warning=FALSE} |
| 159 | +readr::read_csv("data-raw/dictionary.csv") |> |
| 160 | + dplyr::filter(file_name == "handpumpstatusdata.rda") |> |
| 161 | + dplyr::select(variable_name:description) |> |
| 162 | + knitr::kable() |> |
| 163 | + kableExtra::kable_styling("striped") |> |
| 164 | + kableExtra::scroll_box(height = "200px") |
| 165 | +``` |
| 166 | + |
| 167 | +## Example |
| 168 | + |
| 169 | +```{r} |
| 170 | +library(handpumpstatusdata) |
| 171 | +
|
| 172 | +# Example 1: Pie Chart Functionality Status Overview |
| 173 | +# Purpose: To show service availability. |
| 174 | +
|
| 175 | +# Load libraries |
| 176 | +library(tidyverse) |
| 177 | +
|
| 178 | +# Filter out NA or empty values |
| 179 | +data_filtered <- handpumpstatusdata %>% |
| 180 | + filter(!is.na(functionality_survey), functionality_survey != "") |
| 181 | +
|
| 182 | +# Summarise counts and calculate percentages |
| 183 | +functionality_counts <- data_filtered %>% |
| 184 | + group_by(functionality_survey) %>% |
| 185 | + summarise(count = n(), .groups = "drop") %>% |
| 186 | + mutate(percent = round(100 * count / sum(count), 1), |
| 187 | + label = paste0(percent, "%")) |
| 188 | +
|
| 189 | +# Create pie chart with percentages |
| 190 | +ggplot(functionality_counts, aes(x = "", y = count, fill = functionality_survey)) + |
| 191 | + geom_col(width = 1, color = "white") + |
| 192 | + coord_polar(theta = "y") + |
| 193 | + geom_text(aes(label = label), |
| 194 | + position = position_stack(vjust = 0.5), color = "white", size = 4) + |
| 195 | + labs( |
| 196 | + title = "Functionality Status Overview", |
| 197 | + fill = "Functionality" |
| 198 | + ) + |
| 199 | + theme_void() + |
| 200 | + theme( |
| 201 | + plot.title = element_text(hjust = 0.5, face = "bold"), |
| 202 | + legend.title = element_text(face = "bold") |
| 203 | + ) |
| 204 | +
|
| 205 | +# Example 2: Environmental Risk Factors |
| 206 | +# Purpose: Links potential contamination risks to water point locations. |
| 207 | +
|
| 208 | +# Load libraries |
| 209 | +library(tidyverse) |
| 210 | +
|
| 211 | +# Select relevant environmental risk variables and reshape |
| 212 | +risk_data <- handpumpstatusdata %>% |
| 213 | + select(waterpoint_name, |
| 214 | + latrines_within_50m, |
| 215 | + cemetery_within_50m, |
| 216 | + waste_within_50m, |
| 217 | + river_within_50m, |
| 218 | + lake_within_50m) %>% |
| 219 | + pivot_longer( |
| 220 | + cols = -waterpoint_name, |
| 221 | + names_to = "risk_factor", |
| 222 | + values_to = "present" |
| 223 | + ) |
| 224 | +
|
| 225 | +# Clean labels for risk factors |
| 226 | +risk_data <- risk_data %>% |
| 227 | + mutate( |
| 228 | + risk_factor = recode(risk_factor, |
| 229 | + latrines_within_50m = "Latrines", |
| 230 | + cemetery_within_50m = "Cemeteries", |
| 231 | + waste_within_50m = "Waste", |
| 232 | + river_within_50m = "Rivers", |
| 233 | + lake_within_50m = "Lakes") |
| 234 | + ) |
| 235 | +
|
| 236 | +# Count presence of each risk factor |
| 237 | +risk_counts <- risk_data %>% |
| 238 | + filter(!is.na(present), tolower(present) == "yes") %>% |
| 239 | + group_by(risk_factor) %>% |
| 240 | + summarise(count = n(), .groups = "drop") |
| 241 | +
|
| 242 | +# Stacked bar chart |
| 243 | +ggplot(risk_counts, aes(x = risk_factor, y = count, fill = risk_factor)) + |
| 244 | + geom_bar(stat = "identity") + |
| 245 | + labs( |
| 246 | + title = "Environmental Risk Factors within 50m", |
| 247 | + x = "Risk Factor", |
| 248 | + y = "Number of Water Points" |
| 249 | + ) + |
| 250 | + theme_minimal(base_size = 14) + |
| 251 | + theme(legend.position = "none") |
| 252 | +``` |
| 253 | + |
| 254 | +## License |
| 255 | + |
| 256 | +Data are available as |
| 257 | +[CC-BY](https://github.com/openwashdata/%7B%7B%7Bpackagename%7D%7D%7D/blob/main/LICENSE.md). |
| 258 | + |
| 259 | +## Citation |
| 260 | + |
| 261 | +Please cite this package using: |
| 262 | + |
| 263 | +```{r} |
| 264 | +citation("handpumpstatusdata") |
| 265 | +``` |
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