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    • aind-ibl-capsule-converter

      Public
      Python
      0000Updated Apr 25, 2026Apr 25, 2026
    • convert ephys data for use in ibl gui
      Python
      MIT License
      1020Updated Apr 25, 2026Apr 25, 2026
    • Workflows using uv and commitizen to ci, tag, and publish python projects
      MIT License
      0000Updated Apr 25, 2026Apr 25, 2026
    • Glutamate Imaging Analysis Toolbox, MATLAB implementation
      0000Updated Apr 25, 2026Apr 25, 2026
    • posetail

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      0100Updated Apr 25, 2026Apr 25, 2026
    • A repository to run VrForaging + Fip experiments
      Python
      MIT License
      1011Updated Apr 25, 2026Apr 25, 2026
    • aind-ophys-motion-correction

      Public
      Python
      MIT License
      01110Updated Apr 25, 2026Apr 25, 2026
    • Website for public metadata visualization
      Python
      MIT License
      1031Updated Apr 25, 2026Apr 25, 2026
    • A repository for calibration and configuration of the harp olfactometer device
      C#
      MIT License
      0121Updated Apr 25, 2026Apr 25, 2026
    • Task implemention of VR Foraging experiment
      C#
      MIT License
      0381Updated Apr 25, 2026Apr 25, 2026
    • zombie

      Public
      JavaScript
      MIT License
      1071Updated Apr 25, 2026Apr 25, 2026
    • rachel's analysis utils for AIND-analysis-framework instances.
      Python
      MIT License
      0002Updated Apr 25, 2026Apr 25, 2026
    • clabe

      Public
      Command-line-interface Launcher for AIND Behavior Experiments
      Python
      MIT License
      0051Updated Apr 25, 2026Apr 25, 2026
    • Rhapso

      Public
      An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.
      Python
      MIT License
      06225Updated Apr 24, 2026Apr 24, 2026
    • A repository with curricula for the VrForaging platform
      Python
      MIT License
      0110Updated Apr 24, 2026Apr 24, 2026
    • Performs integrated quality control for a complete HCR experiment by combining ROI shape metrics, pairwise unmixing outputs, and cell typing results into a sing…
      Jupyter Notebook
      MIT License
      0000Updated Apr 24, 2026Apr 24, 2026
    • 2P planar optical physiology processing pipeline
      Nextflow
      MIT License
      0041Updated Apr 24, 2026Apr 24, 2026
    • Cell classification head for mesoscale resolution using a 3D foundational image encoder
      Python
      MIT License
      0000Updated Apr 24, 2026Apr 24, 2026
    • 0364: This repository contains the hardware, firmware, and software related to the Harp quad DAC
      C++
      MIT License
      00312Updated Apr 24, 2026Apr 24, 2026
    • This capsule takes an input raw NWB file of fiber data and creates processed DFF traces
      Python
      MIT License
      0091Updated Apr 24, 2026Apr 24, 2026
    • TypeScript
      0081Updated Apr 24, 2026Apr 24, 2026
    • A library for defining and maintaining behavior tasks.
      Python
      MIT License
      0121Updated Apr 24, 2026Apr 24, 2026
    • Dockerfile
      MIT License
      0002Updated Apr 24, 2026Apr 24, 2026
    • Python
      MIT License
      0000Updated Apr 24, 2026Apr 24, 2026
    • Upgrade JSON metadata from old versions of aind-data-schema
      Python
      MIT License
      21123Updated Apr 24, 2026Apr 24, 2026
    • Automates sectioning quality control for the Prototome/Pylasso. Analyzes block face images to grade cuts (Go/No-Go/Unsure) based on knife marks, splits, thickne…
      Python
      MIT License
      0031Updated Apr 24, 2026Apr 24, 2026
    • .github

      Public
      0047Updated Apr 24, 2026Apr 24, 2026
    • 0354: control software for automated tissue clearing system
      Python
      MIT License
      10182Updated Apr 24, 2026Apr 24, 2026
    • This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project…
      Python
      MIT License
      1318320Updated Apr 24, 2026Apr 24, 2026
    • Jupyter Notebook
      MIT License
      0000Updated Apr 24, 2026Apr 24, 2026
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