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    • cerberus

      Public
      Attentive multi-headed and highly trained companion to sequence-to-function deep-learning models
      Python
      0100Updated Apr 23, 2026Apr 23, 2026
    • Stag2

      Public
      Stag2 Paper code from chualec
      Shell
      0000Updated Dec 19, 2025Dec 19, 2025
    • Python
      0000Updated Sep 22, 2025Sep 22, 2025
    • R
      MIT License
      0000Updated Jun 10, 2025Jun 10, 2025
    • lopass

      Public
      Call variants from gVCF file.
      C++
      MIT License
      1410Updated May 12, 2025May 12, 2025
    • This is a repository which hosts instructions to use the Tahoe100M dataset
      Python
      MIT License
      0000Updated May 4, 2025May 4, 2025
    • A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.
      Python
      47000Updated Apr 6, 2025Apr 6, 2025
    • R
      0000Updated Nov 16, 2024Nov 16, 2024
    • Code for Paper : NSD2 is a requisite subunit of the AR/FOXA1 neo-enhanceosome in promoting prostate tumorigenesis
      R
      Apache License 2.0
      1200Updated Jul 26, 2024Jul 26, 2024
    • MIT License
      2500Updated Jul 19, 2024Jul 19, 2024
    • hpseq

      Public
      high-performance next-gen sequencing tools based on htslib, seqtk, and klib
      C
      MIT License
      1000Updated Aug 18, 2023Aug 18, 2023
    • Python
      1000Updated Aug 4, 2023Aug 4, 2023
    • hapster

      Public
      Python
      0180Updated Jun 12, 2022Jun 12, 2022
    • tagtile

      Public
      TAGTILE Probes and Code
      R
      0000Updated Oct 1, 2019Oct 1, 2019
    • cnvex

      Public
      CNVex
      R
      MIT License
      1210Updated Feb 7, 2019Feb 7, 2019
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