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    • Modular, Scalable Phenomic Data Processing Pipelines
      Python
      MIT License
      4511Updated Apr 8, 2026Apr 8, 2026
    • Environmental association for thermal and PS2 data from the gantry.
      Jupyter Notebook
      1000Updated Mar 9, 2026Mar 9, 2026
    • Extracts per-date and per-season weather data from ClimaVue50 data after HDF5 extraction
      Jupyter Notebook
      0000Updated Jan 5, 2026Jan 5, 2026
    • Python
      0020Updated Oct 20, 2025Oct 20, 2025
    • 3D Module: GUI for point cloud landmark selection
      Python
      MIT License
      0010Updated Oct 6, 2025Oct 6, 2025
    • Python
      0030Updated Sep 10, 2025Sep 10, 2025
    • Python
      1000Updated Sep 3, 2025Sep 3, 2025
    • Python
      0010Updated Aug 26, 2025Aug 26, 2025
    • DGCNN Segmentation of Sorghum (focal plant and leaf segmentation)
      Jupyter Notebook
      GNU General Public License v3.0
      0410Updated May 27, 2025May 27, 2025
    • Python
      BSD 3-Clause "New" or "Revised" License
      0000Updated Mar 21, 2025Mar 21, 2025
    • Python
      BSD 3-Clause "New" or "Revised" License
      1000Updated Mar 20, 2025Mar 20, 2025
    • Conversion of FLIR bin files to geoTIFFs with calibration
      Python
      BSD 3-Clause "New" or "Revised" License
      0000Updated Mar 20, 2025Mar 20, 2025
    • R
      0000Updated Nov 4, 2024Nov 4, 2024
    • Clustering of plant identifications over a season for individual plant tracking
      Python
      2100Updated Jun 18, 2024Jun 18, 2024
    • Jupyter Notebook
      0000Updated Jun 11, 2024Jun 11, 2024
    • A repository for geo-correcting the ply files after they are merged and aligned and GCPs have been selected by the users manually.
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • In this repository we preprocess the 3D data. It includes merging west and east and aligning north and south using RANSAC and finding passes that might contain …
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Aggregate PSII fluorescence segmentation outputs to Fv/Fm
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Segmentation of pixels to experimentally-determined Fv/Fm contributions
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Conversion of PSII fluorescence bin files to GeoTIFF images
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Extraction of mean temperatures of individual plants
      Python
      0010Updated Jun 9, 2024Jun 9, 2024
    • RGB bin file conversion to geoTIFF
      Python
      0000Updated Jun 9, 2024Jun 9, 2024
    • Detection of individual plants (RGB/FLIR) using a Faster R-CNN detection network
      Python
      1100Updated Jun 8, 2024Jun 8, 2024
    • Stitching of geoTiff images (RGB/FLIR) into agricultural plots
      Python
      0000Updated Jun 8, 2024Jun 8, 2024
    • RGB/FLIR clipping to agricultural plots
      Python
      0000Updated Jun 8, 2024Jun 8, 2024
    • Edit corner coordinates of RGB/FLIR geoTIFFs
      Python
      0001Updated Jun 8, 2024Jun 8, 2024
    • Collection of corner coordinates for RGB/FLIR geoTIFFs
      Python
      0101Updated Jun 8, 2024Jun 8, 2024
    • Python
      0000Updated Jun 8, 2024Jun 8, 2024
    • Python
      0000Updated Jun 8, 2024Jun 8, 2024
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