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    42 repositories

    • power-law-ecology

      Public
      This repo contains the R codes to generate the plots in the article named - 'Importance of power-law distributions in ecology'
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 23, 2026Apr 23, 2026

    • flocking-by-stopping

      Public
      Codes for the paper "Flocking by stopping -- a novel mechanism of consensus in collective movement"
      Python
      •0•0•0•0•Updated Feb 27, 2026Feb 27, 2026

    • Bhat_Guttal_2023_finite_evolution

      Public
      Scripts and data accompanying Bhat and Guttal 2023, "Eco-evolutionary dynamics for finite populations from first principles and noise-induced reversal of select…
      Jupyter Notebook
      •1•0•0•0•Updated Feb 3, 2025Feb 3, 2025

    • data-driven-mesoscale-sde

      Public
      Code for the paper: Data-driven discovery of stochastic dynamical equations of collective motion. Nabeel, A., Jadhav, V., Raj, M. D., Sire, C., Theraulaz, G., E…
      stochastic-differential-equationsvicsek-modelmesoscale
      stochastic-differential-equationsvicsek-modelmesoscalecollective-behaviourself-propelled-particles
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Feb 3, 2025Feb 3, 2025

    • collective-responses-of-flocking-sheep-to-herding-dog

      Public
      This repository contains codes for data and agent-based model analysed in the article "Collective responses of flocking sheep (Ovis aries) to a herding dog (bor…
      collective-behaviourherdingescape-behaviour
      collective-behaviourherdingescape-behaviouragent-based-herding-model
      MATLAB
      •
      GNU General Public License v3.0
      •2•4•0•0•Updated Feb 3, 2025Feb 3, 2025

    • PyDaddy

      Public
      Python package to discover stochastic differential equations from time series data
      pythontime-seriessde
      pythontime-seriessdestochastic-differential-equationstime-series-analysis
      Python
      •
      GNU General Public License v3.0
      •11•99•1•0•Updated Jan 12, 2025Jan 12, 2025

    • trait-variation

      Public
      Python
      •0•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • positive-feedback-cluster-dynamics

      Public
      Some C code to supplement the patchy-ecosterics repository
      Python
      •0•0•0•0•Updated Jan 6, 2025Jan 6, 2025

    • schooling_fish

      Public
      This repository contains codes and data used in the research article "Noise-Induced Schooling of Fish" (https://doi.org/10.1038/s41567-020-0787-y). Currently to…
      MATLAB
      •
      GNU General Public License v3.0
      •0•11•0•0•Updated Oct 16, 2024Oct 16, 2024

    • patchy-ecosterics

      Public
      Investigating cluster dynamics in models of patchy ecosystems
      cellular-automatapercolation-theoryphase-transitions
      cellular-automatapercolation-theoryphase-transitionscritical-thresholdscluster-dynamics
      Python
      •2•2•0•0•Updated Jun 14, 2024Jun 14, 2024

    • Cluster-Size-PLD

      Public
      Producing Cluster Size PLD in R
      R
      •0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

    • Asynchronous-model-apuroopa

      Public
      MATLAB
      •1•0•0•0•Updated Aug 14, 2023Aug 14, 2023

    • MOTHe-GUI

      Public
      Python
      •
      MIT License
      •3•3•1•0•Updated Jun 26, 2023Jun 26, 2023

    • lekking-collective-beh

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Feb 20, 2023Feb 20, 2023

    • Lekking-Perspective

      Public
      Lek as collective behaviour - code and data for male and female activity heatmap
      R
      •1•0•0•0•Updated Dec 3, 2022Dec 3, 2022

    • cohesion-in-collective-motion

      Public
      MATLAB
      •
      MIT License
      •0•2•0•0•Updated Oct 7, 2022Oct 7, 2022

    • mothe

      Public
      An end to end pipeline to track multiple objects against a heterogeneous background with just 5 lines of code
      Python
      •
      MIT License
      •1•0•0•0•Updated Sep 13, 2022Sep 13, 2022

    • alt-stable-states-neindia

      Public
      Codes for the paper: Sarania, Guttal, Tamma, 2022, The absence of alternative stable states in vegetation cover of northeastern India, Royal Society Open Scienc…
      2•0•0•0•Updated Apr 26, 2022Apr 26, 2022

    • shreesh-tracking-project

      Public
      All the code and files used for Shreesh's fish tracking project
      Python
      •0•0•0•0•Updated Apr 22, 2022Apr 22, 2022

    • PercolationModels

      Public
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Nov 15, 2021Nov 15, 2021

    • blackbuck_herd_escape_dynamics

      Public
      0•0•0•0•Updated Oct 11, 2021Oct 11, 2021

    • coarse-graining

      Public
      The codes in this repository coarse-grain the spatial data and calculate the general EWS
      C++
      •1•0•0•0•Updated Oct 4, 2021Oct 4, 2021

    • MergeSplit

      Public
      C++
      •
      MIT License
      •1•0•0•0•Updated Sep 29, 2021Sep 29, 2021

    • PowerLawCriticalityPaper

      Public
      Codes and data files for the paper "Clustering and correlations: Inferring resilience from spatial patterns in ecosystems"
      R
      •
      GNU General Public License v3.0
      •4•0•0•0•Updated Sep 23, 2021Sep 23, 2021

    • seir-covid-india

      Public
      R ShinyApp for Age Structured SEIR model for Covid-19
      R
      •
      MIT License
      •0•1•0•0•Updated Sep 23, 2021Sep 23, 2021

    • Characterizing_noise

      Public
      MATLAB
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 23, 2021Sep 23, 2021

    • Hemigrammus-Data-Correction

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 21, 2021Sep 21, 2021

    • cluster-dynamics

      Public
      cluster dynamics in some interacting particle systems
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated Jul 25, 2021Jul 25, 2021

    • demographic-noise

      Public
      script related to the publication: Majumder, S., Das, A., Kushal, A., Sankaran, S., & Guttal, V. (2021). Finite-size effects, demographic noise, and ecosystem d…
      C++
      •0•0•0•0•Updated Jul 15, 2021Jul 15, 2021

    • EpiTracSim

      Public
      Epidemic contact tracing simulator
      Jupyter Notebook
      •
      BSD 2-Clause "Simplified" License
      •2•0•0•0•Updated May 2, 2020May 2, 2020
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