test_dataimport.py and dataimport_example issues

[kernb2]

Documentation Issues in the test_dataimport.py.
Testing in the test_dataimport.py

• mostly just need to figure out how to test against the indexing error

In the dataimport_example
IndexError Traceback (most recent call last)
in
2 directory = '../ramandecompy/tests/test_files/'
3 # open hdf5 file as read/write
----> 4 dataimport.data_import(hdf5_filename,directory)
5 dataprep.view_hdf5(hdf5_filename+'.hdf5')

~\anaconda3\lib\site-packages\ramandecompy-1.0b0-py3.7.egg\ramandecompy\dataimport.py in data_import(hdf5_filename, directory)
45 if filename.startswith('FA_') and filename.endswith('.csv'):
46 locationandfile = directory + filename
---> 47 dataprep.add_experiment(str(hdf5_filename)+'.hdf5', locationandfile)
48 print('Data from {} fit with compound pseudo-Voigt model. Results saved to {}.'.format(filename, hdf5_filename))
49 # printing out to user the status of the import (because it can take a long time if importing a lot of data,

~\anaconda3\lib\site-packages\ramandecompy-1.0b0-py3.7.egg\ramandecompy\dataprep.py in add_experiment(hdf5_filename, exp_filename)
202 specs = specs.split('_')
203 time = specs[-1]
--> 204 temp = specs[-2]
205 # write data to .hdf5
206 exp_file['{}/{}/wavenumber'.format(temp, time)] = data['wavenumber']

IndexError: list index out of range

[kernb2]

The issue is a dataprep.addexperiment issue with indexing when the experimental file is formatted wrong like this FA_3.6wt%_400C_12.5s.csv' where the 12.5s with the period is throwing off the index.

Here is the index error
IndexError Traceback (most recent call last)
in
3 oldexphdf5 = h5py.File(hdf5_filename+'.hdf5', 'r+')
4 add_experiment('olddataprep_experiment.hdf5', '../ramandecompy/tests/test_files/FA_3.6wt%_300C_25s.csv')
----> 5 add_experiment('olddataprep_experiment.hdf5', '../ramandecompy/tests/test_files/FA_3.6wt%_400C_12.5s.csv')
6 # dataprep.add_experiment('olddataprep_experiment.hdf5', '../ramandecompy/tests/test_files/FA_3.6wt%_300C_45s.csv')

in add_experiment(hdf5_filename, exp_filename)
118 specs = specs.split('_')
119 time = specs[-1]
--> 120 temp = specs[-2]
121 # write data to .hdf5
122 exp_file['{}/{}/wavenumber'.format(temp, time)] = data['wavenumber']

IndexError: list index out of range