From 629c9d1cb46966e99ff8e13ceb3794abf6f6e0b7 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 22 Jun 2026 21:23:38 +0000
Subject: [PATCH] build(deps): bump actions/checkout from 6 to 7 in the actions
 group

Bumps the actions group with 1 update: [actions/checkout](https://github.com/actions/checkout).


Updates `actions/checkout` from 6 to 7
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](https://github.com/actions/checkout/compare/v6...v7)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: actions
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 .github/workflows/cd-python.yaml | 10 +++++-----
 .github/workflows/cd-r.yaml      |  6 +++---
 .github/workflows/ci-R.yml       |  2 +-
 .github/workflows/ci-python.yml  |  6 +++---
 .github/workflows/ci-rust.yaml   |  2 +-
 .github/workflows/draft-pdf.yml  |  2 +-
 6 files changed, 14 insertions(+), 14 deletions(-)

diff --git a/.github/workflows/cd-python.yaml b/.github/workflows/cd-python.yaml
index bbcb3b01..b9620dcc 100644
--- a/.github/workflows/cd-python.yaml
+++ b/.github/workflows/cd-python.yaml
@@ -37,7 +37,7 @@ jobs:
           - runner: ubuntu-latest
             target: ppc64le
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - uses: actions/setup-python@v6
@@ -78,7 +78,7 @@ jobs:
           - runner: ubuntu-latest
             target: armv7
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - uses: actions/setup-python@v6
@@ -115,7 +115,7 @@ jobs:
           - runner: windows-latest
             target: x86
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - uses: actions/setup-python@v6
@@ -152,7 +152,7 @@ jobs:
           - runner: macos-14
             target: aarch64
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - uses: actions/setup-python@v6
@@ -181,7 +181,7 @@ jobs:
     outputs:
       version: ${{ steps.determine-version.outputs.version }}
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - uses: actions/setup-python@v6
diff --git a/.github/workflows/cd-r.yaml b/.github/workflows/cd-r.yaml
index 31818336..31b69d57 100644
--- a/.github/workflows/cd-r.yaml
+++ b/.github/workflows/cd-r.yaml
@@ -20,7 +20,7 @@ jobs:
   build-windows:
     runs-on: windows-latest
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - name: Set up Python
@@ -73,7 +73,7 @@ jobs:
           - runner: macos-15-intel
             target: x86_64
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - name: Set up Python
@@ -116,7 +116,7 @@ jobs:
   build-linux:
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
       - name: Set up Python
diff --git a/.github/workflows/ci-R.yml b/.github/workflows/ci-R.yml
index d4e41733..d31e3096 100644
--- a/.github/workflows/ci-R.yml
+++ b/.github/workflows/ci-R.yml
@@ -19,7 +19,7 @@ jobs:
     name: R project
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
       - uses: prefix-dev/setup-pixi@v0.9.6
         with:
           environments: ${{ env.R_ENV }}
diff --git a/.github/workflows/ci-python.yml b/.github/workflows/ci-python.yml
index 5cc20dee..4aab8ba3 100644
--- a/.github/workflows/ci-python.yml
+++ b/.github/workflows/ci-python.yml
@@ -22,7 +22,7 @@ jobs:
       matrix:
         python-environment: ['py310', 'py311', 'py312', 'py313']
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
       - uses: prefix-dev/setup-pixi@v0.9.6
         with:
           environments: ${{ matrix.python-environment }}
@@ -31,7 +31,7 @@ jobs:
     name: Python benchmarks
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
       - uses: prefix-dev/setup-pixi@v0.9.6
         with:
           environments: py-phylo2vec
@@ -40,7 +40,7 @@ jobs:
     name: Test main demo notebook
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
       - uses: prefix-dev/setup-pixi@v0.9.6
         with:
           environments: py-phylo2vec
diff --git a/.github/workflows/ci-rust.yaml b/.github/workflows/ci-rust.yaml
index 780c9622..819b0d5b 100644
--- a/.github/workflows/ci-rust.yaml
+++ b/.github/workflows/ci-rust.yaml
@@ -23,7 +23,7 @@ jobs:
           # - beta
           # - nightly
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
       - name: Setup Rust
         run: rustup update ${{ matrix.toolchain }} && rustup default ${{ matrix.toolchain }}
       - name: Install rustfmt
diff --git a/.github/workflows/draft-pdf.yml b/.github/workflows/draft-pdf.yml
index d85d3b0a..ee3b5ae1 100644
--- a/.github/workflows/draft-pdf.yml
+++ b/.github/workflows/draft-pdf.yml
@@ -11,7 +11,7 @@ jobs:
     name: Paper Draft
     steps:
       - name: Checkout
-        uses: actions/checkout@v6
+        uses: actions/checkout@v7
       - name: Build draft PDF
         uses: openjournals/openjournals-draft-action@master
         with: