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| 1 | +FROM ubuntu:20.04 |
| 2 | + |
| 3 | +# Set non-interactive frontend to avoid prompts during package installation |
| 4 | +ENV DEBIAN_FRONTEND=noninteractive |
| 5 | +ENV TZ=Europe/Berlin |
| 6 | + |
| 7 | +# Define Binder-required user variables |
| 8 | +ARG NB_USER=jovyan |
| 9 | +ARG NB_UID=1000 |
| 10 | +ENV USER ${NB_USER} |
| 11 | +ENV NB_UID ${NB_UID} |
| 12 | +ENV HOME /home/${NB_USER} |
| 13 | + |
| 14 | +# Install necessary system dependencies |
| 15 | +RUN apt-get update && apt-get install -y \ |
| 16 | + software-properties-common \ |
| 17 | + python3 \ |
| 18 | + python3-pip |
| 19 | + |
| 20 | +# Install scorep from PPA |
| 21 | +RUN add-apt-repository -y ppa:andreasgocht/scorep \ |
| 22 | + && apt-get update \ |
| 23 | + && apt-get install -y scorep |
| 24 | + |
| 25 | +# Upgrade pip and install base Python dependencies |
| 26 | +RUN pip3 install pip setuptools wheel |
| 27 | + |
| 28 | +# Install Score-P Python bindings |
| 29 | +RUN pip3 install --no-cache-dir scorep |
| 30 | + |
| 31 | +# Install JUmPER kernel |
| 32 | +RUN pip3 install --no-cache-dir jumper-kernel && \ |
| 33 | + python3 -m jumper.install |
| 34 | + |
| 35 | +# Create jovyan user with UID 1000 (Binder requirement) |
| 36 | +RUN adduser --disabled-password \ |
| 37 | + --gecos "Default user" \ |
| 38 | + --uid ${NB_UID} \ |
| 39 | + ${NB_USER} |
| 40 | + |
| 41 | +# Copy repository contents to the user's home directory |
| 42 | +WORKDIR ${HOME} |
| 43 | +COPY . ${HOME} |
| 44 | + |
| 45 | +# Change ownership of the directory to the created user |
| 46 | +USER root |
| 47 | +RUN chown -R ${NB_UID} ${HOME} |
| 48 | +USER ${NB_USER} |
| 49 | + |
| 50 | +# Ensure the PATH includes the correct Python location |
| 51 | +ENV PATH="${HOME}/.local/bin:${PATH}" |
| 52 | + |
| 53 | +# Install project dependencies from pyproject.toml using pip |
| 54 | +RUN pip install --no-cache-dir . |
| 55 | + |
| 56 | +# Install JupyterLab and notebook |
| 57 | +RUN pip install --no-cache-dir jupyterlab notebook |
| 58 | + |
| 59 | +# Expose Jupyter Notebook port |
| 60 | +EXPOSE 8888 |
| 61 | + |
| 62 | +# Set the default command for running Jupyter Notebook |
| 63 | +CMD ["jupyter", "notebook", "--NotebookApp.default_url=/lab", "--ip=0.0.0.0", "--port=8888", "--no-browser"] |
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