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1 parent 6f43aa9 commit 01b0b2cCopy full SHA for 01b0b2c
1 file changed
seqchromloader/utils.py
@@ -418,9 +418,9 @@ def compute_mean_std_bigwig(bigwig):
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# iterate all intervals to get the covered length
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length = sum([i[1]-i[0] for i in bw.intervals(chrom)])
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ns.append(length)
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- means.append(bw.stats(chrom, type="mean", exact=True)[0])
+ means.append(bw.stats(chrom, type="mean", exact=True))
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try:
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- stds.append(bw.stats(chrom, type="std", exact=True)[0])
+ stds.append(bw.stats(chrom, type="std", exact=True))
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except RuntimeError:
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logger.error(chrom)
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logger.error(length)
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