Add more missing functionality #12
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| name: Python CLI Tests | |
| on: | |
| push: | |
| branches: | |
| - '**' | |
| tags-ignore: | |
| - '**' | |
| pull_request: | |
| types: [opened, reopened, synchronize] | |
| permissions: | |
| contents: read | |
| actions: read | |
| jobs: | |
| test: | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 30 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10', '3.11', '3.12', '3.13', '3.14'] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| allow-prereleases: true | |
| cache: 'pip' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e ".[dev]" | |
| - name: Run tests with coverage | |
| run: | | |
| pytest tests/ -v --cov=seqera --cov-report=xml --cov-report=term-missing | |
| - name: Upload coverage to Codecov | |
| if: matrix.python-version == '3.12' && matrix.os == 'ubuntu-latest' | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: ./coverage.xml | |
| fail_ci_if_error: false | |
| continue-on-error: true | |
| pre-commit: | |
| name: Pre-commit Checks | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 10 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| cache: 'pip' | |
| - name: Install pre-commit | |
| run: pip install pre-commit | |
| - name: Run pre-commit | |
| run: pre-commit run --all-files |