tower-cli/.github/workflows/python-tests.yml at e64b312b09f3957588e2d8dd14e37dc7d8395f62 · seqeralabs/tower-cli · GitHub

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name: Python CLI Tests
on:
  push:
    branches:
      - '**'
    tags-ignore:
      - '**'
  pull_request:
    types: [opened, reopened, synchronize]

permissions:
  contents: read
  actions: read

jobs:
  test:
    name: Python ${{ matrix.python-version }} on ${{ matrix.os }}
    runs-on: ${{ matrix.os }}
    timeout-minutes: 30
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest]
        python-version: ['3.10', '3.11', '3.12', '3.13', '3.14']

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}
          allow-prereleases: true
          cache: 'pip'

      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          pip install -e ".[dev]"

      - name: Run tests with coverage
        run: |
          pytest tests/ -v --cov=seqera --cov-report=xml --cov-report=term-missing

      - name: Upload coverage to Codecov
        if: matrix.python-version == '3.12' && matrix.os == 'ubuntu-latest'
        uses: codecov/codecov-action@v4
        with:
          file: ./coverage.xml
          fail_ci_if_error: false
        continue-on-error: true

  pre-commit:
    name: Pre-commit Checks
    runs-on: ubuntu-latest
    timeout-minutes: 10

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: '3.12'
          cache: 'pip'

      - name: Install pre-commit
        run: pip install pre-commit

      - name: Run pre-commit
        run: pre-commit run --all-files