|
| 1 | +LICENSES |
| 2 | + |
| 3 | +DNMTools |
| 4 | + |
| 5 | +Copyright (C) 2025 Andrew D Smith |
| 6 | + |
| 7 | +This is free software: you can redistribute it and/or modify it under the |
| 8 | +terms of the GNU General Public License as published by the Free Software |
| 9 | +Foundation, either version 3 of the License, or (at your option) any later |
| 10 | +version. |
| 11 | + |
| 12 | +This software is distributed in the hope that it will be useful, but WITHOUT |
| 13 | +ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS |
| 14 | +FOR A PARTICULAR PURPOSE. See the GNU General Public License for more |
| 15 | +details. |
| 16 | + |
| 17 | +======================================================================== |
| 18 | + |
| 19 | +Additional licenses/copyrights that apply to DNMTools pre-built binaries, |
| 20 | +which link statically to GSL (GNU Scientific Library), ZLib, HTSlib and |
| 21 | +libdeflate. |
| 22 | + |
| 23 | +======================================================================== |
| 24 | +GNU Scientific Library |
| 25 | + |
| 26 | +This copyright notice is taken files at: |
| 27 | +https://savannah.gnu.org/projects/gsl |
| 28 | + |
| 29 | +Copyright (C) 1996-2025 Free Software Foundation, Inc. and the GSL developers |
| 30 | + |
| 31 | +This program is free software; you can redistribute it and/or modify it under |
| 32 | +the terms of the GNU General Public License as published by the Free Software |
| 33 | +Foundation; either version 3 of the License, or (at your option) any later |
| 34 | +version. |
| 35 | + |
| 36 | +This program is distributed in the hope that it will be useful, but WITHOUT |
| 37 | +ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS |
| 38 | +FOR A PARTICULAR PURPOSE. See the GNU General Public License for more |
| 39 | +details. |
| 40 | + |
| 41 | +You should have received a copy of the GNU General Public License along with |
| 42 | +this program; if not, write to the Free Software Foundation, Inc., 51 Franklin |
| 43 | +Street, Fifth Floor, Boston, MA 02110-1301, USA. |
| 44 | + |
| 45 | +======================================================================= |
| 46 | +ZLib |
| 47 | + |
| 48 | +This copyright notice is taken from: |
| 49 | +https://github.com/madler/zlib/blob/develop/LICENSE |
| 50 | + |
| 51 | +Copyright notice: |
| 52 | + |
| 53 | +(C) 1995-2024 Jean-loup Gailly and Mark Adler |
| 54 | + |
| 55 | +This software is provided 'as-is', without any express or implied warranty. |
| 56 | +In no event will the authors be held liable for any damages arising from the |
| 57 | +use of this software. |
| 58 | + |
| 59 | +Permission is granted to anyone to use this software for any purpose, |
| 60 | +including commercial applications, and to alter it and redistribute it freely, |
| 61 | +subject to the following restrictions: |
| 62 | + |
| 63 | +1. The origin of this software must not be misrepresented; you must not claim |
| 64 | + that you wrote the original software. If you use this software in a |
| 65 | + product, an acknowledgment in the product documentation would be |
| 66 | + appreciated but is not required. |
| 67 | +2. Altered source versions must be plainly marked as such, and must not be |
| 68 | + misrepresented as being the original software. |
| 69 | +3. This notice may not be removed or altered from any source distribution. |
| 70 | + |
| 71 | +Jean-loup Gailly Mark Adler |
| 72 | +jloup@gzip.org madler@alumni.caltech.edu |
| 73 | + |
| 74 | +======================================================================= |
| 75 | +libdeflate |
| 76 | + |
| 77 | +This copyright notice is taken from: |
| 78 | +https://github.com/ebiggers/libdeflate/blob/master/COPYING |
| 79 | + |
| 80 | +Copyright 2016 Eric Biggers |
| 81 | +Copyright 2024 Google LLC |
| 82 | + |
| 83 | +Permission is hereby granted, free of charge, to any person obtaining a copy |
| 84 | +of this software and associated documentation files (the "Software"), to deal |
| 85 | +in the Software without restriction, including without limitation the rights |
| 86 | +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell |
| 87 | +copies of the Software, and to permit persons to whom the Software is |
| 88 | +furnished to do so, subject to the following conditions: |
| 89 | + |
| 90 | +The above copyright notice and this permission notice shall be included in all |
| 91 | +copies or substantial portions of the Software. |
| 92 | + |
| 93 | +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR |
| 94 | +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, |
| 95 | +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE |
| 96 | +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER |
| 97 | +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, |
| 98 | +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE |
| 99 | +SOFTWARE. |
| 100 | + |
| 101 | +======================================================================= |
| 102 | +HTSlib |
| 103 | + |
| 104 | +This copyright notice is taken from: |
| 105 | +https://github.com/samtools/htslib/blob/develop/LICENSE |
| 106 | + |
| 107 | +The MIT/Expat License |
| 108 | + |
| 109 | +Copyright (C) 2012-2025 Genome Research Ltd. |
| 110 | + |
| 111 | +Permission is hereby granted, free of charge, to any person obtaining a copy |
| 112 | +of this software and associated documentation files (the "Software"), to deal |
| 113 | +in the Software without restriction, including without limitation the rights |
| 114 | +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell |
| 115 | +copies of the Software, and to permit persons to whom the Software is |
| 116 | +furnished to do so, subject to the following conditions: |
| 117 | + |
| 118 | +The above copyright notice and this permission notice shall be included in all |
| 119 | +copies or substantial portions of the Software. |
| 120 | + |
| 121 | +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR |
| 122 | +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, |
| 123 | +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE |
| 124 | +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER |
| 125 | +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, |
| 126 | +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE |
| 127 | +SOFTWARE. |
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