dockerImage/core.dockerfile at main · statgarten/dockerImage · GitHub

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FROM rocker/shiny:4.3.1 as build

ARG GITHUB_PAT
ENV GITHUB_PAT $GITHUB_PAT

RUN R -e "install.packages('remotes')"
RUN apt-get update
RUN apt-get install -y libglpk-dev

#scissor, datatoys, board, stove, colorpen, soroban, door
RUN R -e "remotes::install_github('statgarten/scissor', ask=FALSE)"
# RUN R -e "remotes::install_github('statgarten/datatoys', ask=FALSE)"
RUN R -e "remotes::install_github('statgarten/board', ask=FALSE)"
RUN R -e "remotes::install_github('statgarten/stove', ask=FALSE)"
RUN R -e "remotes::install_github('statgarten/colorpen', ask=FALSE)"
RUN R -e "remotes::install_github('statgarten/soroban', ask=FALSE)"
RUN R -e "remotes::install_github('statgarten/door', ask=FALSE)"
RUN R -e "remove.packages('lightgbm')"
RUN R -e "install.packages('lightgbm', version = '3.3.5')"

FROM rocker/shiny:4.3.1
RUN apt-get update
RUN apt-get install -y libglpk-dev
COPY --from=build /usr/local/lib/R/site-library/ /usr/local/lib/R/site-library
COPY ShinyApps/app.R /srv/shiny-server/app.R
RUN rm -r /srv/shiny-server/index.html /srv/shiny-server/sample-apps

EXPOSE 3838
# USER root
#CMD ["bash"]
CMD ["/usr/bin/shiny-server"]

# # Noninteractive Setting
# ENV DEBIAN_FRONTEND noninteractive

# RUN apt-get update && apt-get install -y dirmngr gnupg apt-transport-https ca-certificates software-properties-common locales

# # Set Locale
# RUN locale-gen en_US.UTF-8
# RUN update-locale LANG=en_US.UTF-8

# #Setting for tzdata
# RUN ln -fs /usr/share/zoneinfo/Asia/Seoul /etc/localtime && dpkg-reconfigure --frontend noninteractive tzdata

# # statgarten dependencies
# RUN apt-get install -y libssl-dev libcurl4-openssl-dev libxml2-dev libfreetype6-dev libgdal-dev cmake

# # shinyserver dependencies
# RUN apt-get install -y wget gdebi
# RUN apt-get install -y \
#     --no-install-recommends \
#     git-core \
#     libssl-dev \
#     libcurl4-gnutls-dev \
#     curl \
#     libsodium-dev \
#     libxml2-dev \
#     libicu-dev \
#     && apt-get clean \
#     && rm -rf /var/lib/apt/lists/*

# # install R

# RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9
# RUN add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/'

# RUN apt install -y r-base-core
# RUN apt install -y r-recommended
# RUN apt install -y r-base

# # for install_github
# RUN R -e "install.packages('remotes')"

# # statgarten dependencies - door
# RUN R -e "install.packages(c('dplyr', 'httr', 'rvest', 'xml2', 'tidyverse', 'plotly', 'leaflet', 'ggparty', 'caret', 'reactable', 'ggpie', 'naniar'))"
# RUN R -e "remotes::install_github('vqv/ggbiplot')"

# # statgarten dependencies - colorpen
# RUN R -e "install.packages('phosphoricons')"

# # statgarten dependencies - board
# RUN R -e "install.packages(c('shinydashboardPlus'))"

# # statgarten dependencies - colorpen
# RUN R -e "install.packages(c('shiny.i18n'))"

# # statgarten dependencies - soroban
# RUN R -e "install.packages(c('showtext'))"

# # statgarten depencencies - scissor
# RUN R -e "install.packages(c('RSQLite', 'sortable', 'writexl'))"

# # statgarten dependencies - goophi
# RUN R -e "install.packages(c('factoextra', 'rstanarm'))"
# RUN R -e "remotes::install_github('statgarten/datatoys')"
# RUN R -e "remotes::install_github('statgarten/board')"
# RUN R -e "remotes::install_github('statgarten/stove')"
# RUN R -e "remotes::install_github('statgarten/colorpen')"
# RUN R -e "remotes::install_github('statgarten/soroban')"
# RUN R -e "remotes::install_github('statgarten/scissor')"
# RUN R -e "remotes::install_github('statgarten/door')"

# RUN wget --no-verbose https://s3.amazonaws.com/rstudio-shiny-server-os-build/ubuntu-18.04/x86_64/VERSION -O "version.txt" && \
#     VERSION=$(cat version.txt)  && \
#     wget --no-verbose "https://download3.rstudio.org/ubuntu-18.04/x86_64/shiny-server-$VERSION-amd64.deb" -O ss-latest.deb && \
#     gdebi -n ss-latest.deb && \
#     rm -f version.txt ss-latest.deb

# COPY group /etc/group
# COPY passwd /etc/passwd
# COPY sudoers /etc/sudoers
# RUN chmod 644 /etc/group
# RUN chmod 644 /etc/passwd
# RUN chmod 644 /etc/sudoers

# # install TeX
# RUN apt-get install -y texlive-base texlive-latex-base texlive-latex-extra
# USER shiny
# RUN tlmgr init-usertree
# RUN tlmgr option repository http://ftp.math.utah.edu/pub/tex/historic/systems/texlive/2019/tlnet-final
# RUN tlmgr install pdftexcmds --verify-repo=none
# RUN tlmgr install infwarerr --verify-repo=none
# RUN tlmgr install pdfescape --verify-repo=none
# RUN tlmgr install letltxmacro --verify-repo=none
# USER root
# RUN R -e "install.packages('tinytex')"
# RUN R -e "tinytex::install_tinytex(force = TRUE)"

# #COPY ini.sh /etc/ini.sh
# COPY ShinyApps/app.R /srv/shiny-server/app.R
# RUN rm -r /srv/shiny-server/index.html /srv/shiny-server/sample-apps
# RUN chmod 777 -R /tmp
# WORKDIR /var/log/shiny-server
# EXPOSE 3838

# CMD ["/usr/bin/shiny-server"]