In this order:
sh .backup/backup.sh
git pull
Check upstream remote settings
$ git remote -v
...
upstream https://github.com/edemaine/coauthor (fetch)
upstream git@github.com:edemaine/coauthor (push)
Then
git fetch upstream
git merge upstream/master
And commit if necessary.
rm -rf node_modules package-lock.json
meteor npm install
mup deploy