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README.md

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## Installation
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WorkflowHub is available on [PyPI](https://pypi.org/project/workflowhub).
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WorkflowHub requires Python3.6+ and has been tested on Linux and macOS.
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WfCommons is available on [PyPI](https://pypi.org/project/workflowhub).
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WfCommons requires Python3.6+ and has been tested on Linux and macOS.
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### Requirements
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#### Graphviz
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WorkflowHub uses _pygraphviz_ and thus needs the graphviz package installed (version 2.16 or later).
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WfCommons uses _pygraphviz_ and thus needs the graphviz package installed (version 2.16 or later).
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You can install graphviz easily on Linux with your favorite package manager,
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for example for Debian-based distributions:
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```
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### Installation using pip
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While `pip` can be used to install WorkflowHub, we suggest the following
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While `pip` can be used to install WfCommons, we suggest the following
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approach for reliable installation when many Python environments are available:
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```
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### Retrieving the latest unstable version
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If you want to use the latest WorkflowHub unstable version, that will contain
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If you want to use the latest WfCommons unstable version, that will contain
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brand new features (but also contain bugs as the stabilization work is still
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underway), you may consider retrieving the latest unstable version.
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Cloning from [WorkflowHub's GitHub](https://github.com/workflowhub/workflowhub)
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Cloning from [WfCommons's GitHub](https://github.com/wfcommons/wfcommons)
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repository:
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```
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$ git clone https://github.com/workflowhub/workflowhub
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$ cd workflowhub
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$ git clone https://github.com/wfcommons/wfcommons
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$ cd wfcommons
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$ pip install .
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```
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## Get in Touch
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The main channel to reach the WorkflowHub team is via the support email:
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[support@workflowhub.org](mailto:support@workflowhub.org).
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The main channel to reach the WfCommons team is via the support email:
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[support@wfcommons.org](mailto:support@wfcommons.org).
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**Bug Report / Feature Request:** our preferred channel to report a bug or request a feature is via
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WorkflowHub's [Github Issues Track](https://github.com/workflowhub/workflowhub/issues).
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WfCommons's [Github Issues Track](https://github.com/wfcommons/wfcommons/issues).
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## Citing WorkflowHub
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When citing WRENCH, please use the following paper. You should also actually read
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## Citing WfCommons
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When citing WfCommons, please use the following paper. You should also actually read
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that paper, as it provides a recent and general overview on the framework.
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```
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}
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```
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[build-badge]: https://github.com/workflowhub/workflowhub/workflows/Build/badge.svg
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[build-link]: https://github.com/workflowhub/workflowhub/actions
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[build-badge]: https://github.com/wfcommons/wfcommons/workflows/Build/badge.svg
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[build-link]: https://github.com/wfcommons/wfcommons/actions
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[pypi-badge]: https://badge.fury.io/py/workflowhub.svg
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[pypi-link]: https://badge.fury.io/py/workflowhub
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[license-badge]: https://img.shields.io/badge/License-LGPL%20v3-blue.svg
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[codefactor-badge]: https://www.codefactor.io/repository/github/workflowhub/workflowhub/badge
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[codefactor-link]: https://www.codefactor.io/repository/github/workflowhub/workflowhub
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[rtd-badge]: https://readthedocs.org/projects/workflowhub/badge/?version=latest
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[rtd-link]: https://workflowhub.readthedocs.io/en/latest/?badge=latest
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[codefactor-badge]: https://www.codefactor.io/repository/github/wfcommons/wfcommons/badge
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[codefactor-link]: https://www.codefactor.io/repository/github/wfcommons/wfcommons
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[rtd-badge]: https://readthedocs.org/projects/wfcommons/badge/?version=latest
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[rtd-link]: https://wfcommons.readthedocs.io/en/latest/?badge=latest

docs/source/conf.py

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import sys
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# Fetch the version
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exec(open('../../workflowhub/version.py').read())
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exec(open('../../wfcommons/version.py').read())
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sys.path.insert(0, os.path.abspath('../..'))
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sys.setrecursionlimit(1500)
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# -- Project information -----------------------------------------------------
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project = 'WorkflowHub'
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copyright = '2020-2021, WorkflowHub Team'
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author = 'WorkflowHub Team'
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project = 'WfCommons'
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copyright = '2020-2021, WfCommons Team'
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author = 'WfCommons Team'
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# The short X.Y version
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version = str(__version__)

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setup.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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#
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# Copyright (c) 2020-2021 The WorkflowHub Team.
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# Copyright (c) 2020-2021 The WfCommons Team.
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#
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# This program is free software: you can redistribute it and/or modify
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# it under the terms of the GNU General Public License as published by
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long_description = fh.read()
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# Fetch the version
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exec(open('workflowhub/version.py').read())
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exec(open('wfcommons/version.py').read())
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setup(
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name='workflowhub',
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name='wfcommons',
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version=str(__version__),
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license='GPLv3',
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author='WorkflowHub team',
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author_email='support@workflowhub.org',
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author='WfCommons team',
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author_email='support@wfcommons.org',
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description='Community Framework for Enabling Scientific Workflow Research and Education',
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long_description=long_description,
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long_description_content_type='text/markdown',
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url='https://github.com/workflowhub/workflowhub',
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url='https://github.com/wfcommons/wfcommons',
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packages=find_packages(),
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install_requires=[
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'jsonschema',
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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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#
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# Copyright (c) 2020 The WorkflowHub Team.
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# Copyright (c) 2020-2021 The WfCommons Team.
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#
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# This program is free software: you can redistribute it and/or modify
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# it under the terms of the GNU General Public License as published by
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from .version import __version__
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__author__ = 'WorkflowHub Team - https://workflowhub.org'
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__author__ = 'WfCommons Team - https://wfcommons.org'
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__credits__ = 'University of Southern California, University of Hawaii at Manoa'
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import logging
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from .generator import WorkflowGenerator
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from .trace import Trace, TraceAnalyzer, TraceElement
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logging.getLogger('workflowhub').addHandler(logging.NullHandler())
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logging.getLogger('wfcommons').addHandler(logging.NullHandler())
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'schemaVersion': self.schema_version,
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'author': {
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'name': str(getpass.getuser()),
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'email': 'support@workflowhub.org'
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'email': 'support@wfcommons.org'
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},
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'wms': {
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'name': self.wms_name,

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