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(#12) adding generator for BLAST workflow
1 parent 8a6335f commit ef520b7

1 file changed

Lines changed: 32 additions & 28 deletions

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workflowhub/generator/workflow/blast_recipe.py

Lines changed: 32 additions & 28 deletions
Original file line numberDiff line numberDiff line change
@@ -249,6 +249,19 @@ def _workflow_recipe(self) -> Dict:
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"min": 7688,
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"max": 7688
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},
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".fasta": {
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"distribution": {
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"name": "trapz",
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"params": [
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0.9999999999999999,
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1.0,
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-0.10500000000000001,
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1.1999999999999997
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]
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},
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"min": 6,
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"max": 2015
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},
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"nt": {
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"distribution": {
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"name": "trapz",
@@ -259,8 +272,8 @@ def _workflow_recipe(self) -> Dict:
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1.1999999999999997
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]
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},
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"min": 6927,
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"max": 2152118512
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"min": 0,
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"max": 5117704493
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}
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},
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"output": {
@@ -280,19 +293,6 @@ def _workflow_recipe(self) -> Dict:
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"distribution": "None",
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"min": 0,
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"max": 0
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},
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".fasta": {
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"distribution": {
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"name": "trapz",
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"params": [
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0.9999999999999999,
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1.0,
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-0.10500000000000001,
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1.1999999999999997
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]
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},
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"min": 6,
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"max": 2015
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}
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}
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},
@@ -313,6 +313,18 @@ def _workflow_recipe(self) -> Dict:
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"distribution": "None",
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"min": 1,
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"max": 1
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},
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".out": {
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"distribution": {
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"name": "argus",
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"params": [
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2.465535551931572e-05,
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-0.7452662890705088,
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1.7477663092998088
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]
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},
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"min": 5,
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"max": 17952
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}
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},
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"output": {
@@ -326,18 +338,6 @@ def _workflow_recipe(self) -> Dict:
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},
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"min": 454,
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"max": 565948
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},
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".out": {
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"distribution": {
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"name": "argus",
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"params": [
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2.465535551931572e-05,
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-0.7452662890705088,
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1.7477663092998088
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]
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},
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"min": 5,
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"max": 17952
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}
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}
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},
@@ -354,7 +354,11 @@ def _workflow_recipe(self) -> Dict:
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}
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},
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"input": {
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".err": {
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"distribution": "None",
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"min": 0,
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"max": 0
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}
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},
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"output": {
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".err": {

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