Update README.md

edits

Author: br-amaral

README.md

@@ -5,9 +5,9 @@
 
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-Here are the steps and information to add a new GitHub repository to the [Zipkin Lab Code Archive](https://zipkinlab.github.io/) front-face page, if you are one of the 'GitHub people'. 
+Here are the steps and information to add a new GitHub repository to the <a href="https://zipkinlab.github.io/" style="color: #077907ff;">Zipkin Lab Code Archive</a> front-face page, if you are one of the 'GitHub people'. 
 
-The lab archive is the website where all our code and data can 'live through eternity', and where we can direct people who ask about our analysis or data. The [Lab Code Archive](https://github.com/zipkinlab/zipkinlab.github.io) is a single repository that lives within the [Zipkin Lab's GitHub](https://github.com/zipkinlab) page. It creates and links the [Zipkin Lab Archive website](https://zipkinlab.github.io/) to all other repositories that are stored in the lab GitHub. 
+The lab archive is the website where all our code and data can 'live through eternity', and where we can direct people who ask about our analysis or data. The <a href="https://github.com/zipkinlab/zipkinlab.github.io" style="color: #077907ff;">Lab Code Archive</a> is a single repository that lives within the <a href="https://github.com/zipkinlab" style="color: #077907ff;">Zipkin Lab's GitHub</a> page. It creates and links the <a href="https://zipkinlab.github.io/" style="color: #077907ff;">Zipkin Lab Archive website</a> to all other repositories that are stored in the lab GitHub. 
 
 <div align="center">
 <img src="assets/images/lab_page.png" alt="lab_page" width="600">
@@ -19,7 +19,7 @@ The lab archive is the website where all our code and data can 'live through ete
 
 ### 1 - Fork personal repository to Zipkin Lab GitHub
 
-All repositories should be on the [Zipkin Lab GitHub](https://github.com/zipkinlab) and linked from there (not from personal GitHub accounts) to the front-facing page. So step one is **forking** someone's repository into it.
+All repositories should be on the <a href="https://github.com/zipkinlab" style="color: #077907ff;">Zipkin Lab GitHub</a> and linked from there (not from personal GitHub accounts) to the front-facing page. So step one is **forking** someone's repository into it.
 
 - Navigate to the repository you want to fork.
 - Click the **Fork** button (top-right of the page).
@@ -31,29 +31,29 @@ All repositories should be on the [Zipkin Lab GitHub](https://github.com/zipkinl
 
 ### 2 - Gather required information
 
-There are two documents to use as reference (available on the [Zipkin Lab Teams GitHub page](https://teams.microsoft.com/l/channel/19%3A15762ca26189456f989a45136b141e94%40thread.tacv2/GitHub?groupId=a1e331a0-3ad7-4671-a13e-3629dea6fd3b&tenantId=22177130-642f-41d9-9211-74237ad5687d)) to gather all the info you need:
+There are two documents to use as reference (available on the <a href="https://teams.microsoft.com/l/channel/19%3A15762ca26189456f989a45136b141e94%40thread.tacv2/GitHub?groupId=a1e331a0-3ad7-4671-a13e-3629dea6fd3b&tenantId=22177130-642f-41d9-9211-74237ad5687d" style="color: #077907ff;">Zipkin Lab Teams GitHub page</a>) to gather all the info you need:
 
 - A checklist to track added papers, and what info you have or are still missing:  
-  [GithubProjects.xlsx](https://michiganstate.sharepoint.com/:x:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/GithubProjects.xlsx)
+  <a href="https://michiganstate.sharepoint.com/:x:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/GithubProjects.xlsx" style="color: #077907ff;">GithubProjects.xlsx</a>
 
 - A document with detailed instructions on what each field in the spreadsheet above is:  
-  [Github Project Checklist.docx](https://michiganstate.sharepoint.com/:w:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/Github%20Project%20Checklist.docx)
+  <a href="https://michiganstate.sharepoint.com/:w:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/Github%20Project%20Checklist.docx" style="color: #077907ff;">Github Project Checklist.docx</a>
 
 ---
 
 ### 3 - Edit the front-facing page
 
-- Edits are done in the [index.html](https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html) file.
+- Edits are done in the <a href="https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html" style="color: #077907ff;">index.html</a> file.
 - Insert your new HTML block **within the appropriate paper category** (e.g., community models, unmarked population models).
 - New papers go at the top of the section.
 - You can add information manually, or use the code automation below:
 
 #### Automated version:
 
-- The paper metadata goes into the [github_dat.csv](https://michiganstate.sharepoint.com/:x:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/github_dat.csv) file template. Just download it and substitute the fields with the details of the paper you want to add.
+- The paper metadata goes into the <a href="https://michiganstate.sharepoint.com/:x:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/github_dat.csv" style="color: #077907ff;">github_dat.csv</a> file template. Just download it and substitute the fields with the details of the paper you want to add.
 
   <details>
-  <summary>Click to see code that creates github_dat.csv</summary>
+  <summary><span style="color: #077907ff; font-style: italic;">Click to see code from github_html.r</span></summary>
 
   ````r
   library(tidyverse)
@@ -76,10 +76,10 @@ There are two documents to use as reference (available on the [Zipkin Lab Teams
 <img src="assets/images/git_dat.png" alt="git_dat" width="400">
 </div>
 
--  Now that you have the new `github_dat.csv` file in your working directory, run [github_html.r](https://michiganstate.sharepoint.com/:u:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/github_html.r) to create the HTML code snippets that should be added to [index.html](https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html).
+-  Now that you have the new `github_dat.csv` file in your working directory, run <a href="https://michiganstate.sharepoint.com/:u:/r/sites/STUOT-ResearchGroup/Shared%20Documents/GitHub/github_html.r" style="color: #077907ff;">github_html.r</a> to create the HTML code snippets that should be added to <a href="https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html" style="color: #077907ff;">index.html</a>.
 
     <details>
-    <summary>Click to see code from github_html.r</summary>
+    <summary><span style="color: #077907ff; font-style: italic;">Click to see code from github_html.r</span></summary>
 
     ````r
     ## code to create html file for the lab front-facing page
@@ -157,19 +157,19 @@ There are two documents to use as reference (available on the [Zipkin Lab Teams
     ````
 
     </details><br>
-- Paste the html code snippets from `git_text.txt` and `git_title.txt` into the [index.html](https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html) file (you have to hit 'edit' and commit it!). <br>
+- Paste the html code snippets from `git_text.txt` and `git_title.txt` into the <a href="https://github.com/zipkinlab/zipkinlab.github.io/blob/master/index.html" style="color: #077907ff;">index.html</a> file (you have to hit 'edit' and commit it!). <br>
 
-- Add a figure (.PNG) to the [assets/images/](https://github.com/zipkinlab/zipkinlab.github.io/tree/master/assets/images) folder on GitHub. The figure name should match the citation (e.g., `Zipkin_etal_2025_MEE.png`).
+- Add a figure (.PNG) to the <a href="https://github.com/zipkinlab/zipkinlab.github.io/tree/master/assets/images" style="color: #077907ff;">assets/images/</a> folder on GitHub. The figure name should match the citation (e.g., `Zipkin_etal_2025_MEE.png`).
 
 ---
 
 ### 4 - Add metadata to the `Archived-data` repository
 
-- Upload the relevant data/code links to the [Archived-data repo](https://github.com/zipkinlab/Archived-data).
+- Upload the relevant data/code links to the <a href="https://github.com/zipkinlab/Archived-data" style="color: #077907ff;">Archived-data repo</a>.
 
 ---
 
-#### Open the [Zipkin Lab Code Archive](https://zipkinlab.github.io/) to check if your edits are correct and... 
+#### Open the <a href="https://zipkinlab.github.io/" style="color: #077907ff;">Zipkin Lab Code Archive</a> to check if your edits are correct and... 
 
 ## 🎉 YAY, you are done!!!
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