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Pull requests: DataBiosphere/azul

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Pull requests list

Promotion 2026-03-31 anvilprod (#7900) 0 reviews [process] Lead didn't request any changes deploy:shared [process] PR requires deploying `shared` component reindex:anvilprod [process] PR requires reindexing anvilprod reindex:partial [process] PR allows for (de)indexing a specific source or catalog sandbox [process] Resolution is being verified in sandbox deployment
#7907 opened Apr 2, 2026 by achave11-ucsc Loading…
39 of 77 tasks
@achave11-ucsc @dsotirho-ucsc
2
Promotion 2026-03-31 prod (#7900) 0 reviews [process] Lead didn't request any changes deploy:shared [process] PR requires deploying `shared` component no sandbox [process] PR will not be tested in the sandbox reindex:partial [process] PR allows for (de)indexing a specific source or catalog reindex:prod [process] PR requires reindexing prod
#7906 opened Apr 2, 2026 by achave11-ucsc Loading…
28 of 68 tasks
1
@achave11-ucsc
2
Fix: DeprecationWarning for datetime methods in Python 3.12 (#5953)
#7904 opened Apr 2, 2026 by dsotirho-ucsc • Draft 100+
1
@dsotirho-ucsc
3
Upgrade software dependencies 2026-03-30 (#7898) 0 reviews [process] Lead didn't request any changes backup:gitlab [process] PR requires backing up GitLab instances deploy:gitlab [process] PR requires deploying `gitlab` component deploy:runner [process] PR requires deploying `runner` component deploy:shared [process] PR requires deploying `shared` component reqs [process] PR includes commit requiring ``make requirements``
#7902 opened Mar 31, 2026 by achave11-ucsc Loading…
32 of 84 tasks
@achave11-ucsc
4
Use requester-pays for mirroring in AnVIL deployments (#7794)
#7885 opened Mar 19, 2026 by nadove-ucsc • Draft 100+
1
@nadove-ucsc
2
Fix: awscli forces upper bound on rsa version (#6774) deploy:runner [process] PR requires deploying `runner` component reqs [process] PR includes commit requiring ``make requirements`` upgrade [process] PR includes commit requiring manual upgrade
#7884 opened Mar 18, 2026 by achave11-ucsc • Draft 100+
1
@achave11-ucsc @nadove-ucsc
4
Add support for HCA tissue atlas (#7128) reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7877 opened Mar 17, 2026 by dsotirho-ucsc • Draft 100+
1
@achave11-ucsc @dsotirho-ucsc
12
Consider sharing CLAUDE.md (#7843)
#7876 opened Mar 17, 2026 by achave11-ucsc • Draft 100+
1
@nadove-ucsc
13
Fix: PFB manifest generator uses server-side paging (#7872)
#7873 opened Mar 17, 2026 by nadove-ucsc Loading… 100+
1
@nadove-ucsc
14
Fix: Manifest IT fails with pinned seed (#7835)
#7850 opened Mar 10, 2026 by nadove-ucsc • Draft 100+
1
@nadove-ucsc
2
Use requester-pays for mirroring in AnVIL deployments (#7794)
#7806 opened Feb 25, 2026 by nadove-ucsc • Draft 100+
1
@nadove-ucsc
3
Fix: OpenSearch queries are huge (azul-private#316) 1 review [process] Lead requested changes once
#7775 opened Feb 12, 2026 by nadove-ucsc Loading… 100+
@nadove-ucsc
13
Fix: Eliminate uses of requests library (#7633)
#7745 opened Feb 4, 2026 by achave11-ucsc • Draft 100+
1
@achave11-ucsc
2
OpenSearch queries include many redundant source IDs (#7644)
#7727 opened Jan 29, 2026 by nadove-ucsc • Draft 100+
1
@nadove-ucsc
1
Fix: Accumulator overflow during aggregation (#6793) 0 reviews [process] Lead didn't request any changes API API change affecting callers reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7641 opened Dec 12, 2025 by dsotirho-ucsc Loading… 100+
1
@dsotirho-ucsc
42
Make GitLab instance CIS level 2 compliant (#5990)
#6694 opened Nov 8, 2024 by dsotirho-ucsc • Draft 100+
1
@dsotirho-ucsc
2
Fix: Can't use curl to download a single manifest in one invocation (#5918) 4+ reviews [process] Lead requested changes four times or more API API change affecting callers
#6099 opened Mar 26, 2024 by dsotirho-ucsc Loading… 100+
1
@dsotirho-ucsc
107
ProTip! What’s not been updated in a month: updated:<2026-03-03.