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the GMOD database schema
PLpgSQL 46 23
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 278 80
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 473 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 139 87
JBrowse 2 plugin for editing annotations on an Apollo server
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Read .2bit files with pure JS. Works in node or webpack.
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
Read JBrowse v1 nested containment list feature stores from modern JS
Source code for the JBrowse 2 genome hubs webite and data processing scripts
Hierarchical clustering in javascript
JBrowse fork of mobx-state-tree, based on v5.4.2
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
Variant Call Format (VCF) parser
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