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1. sagar87/spatialproteomics sagar87/spatialproteomics Public

   Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly multiplexed immunohistochemistry data. Docs available here: ht…

   Python 43 8

2. LazDaria/SegTraQ LazDaria/SegTraQ Public

   A Python toolkit for quantitative and visual quality control of segmentation and transcript assignment in spatial omics data.

   Python 25 1

3. scverse/spatialdata-plot scverse/spatialdata-plot Public

   Static plotting for spatialdata

   Python 82 21

4. representation_learning_workshop representation_learning_workshop Public

   This repository hosts the materials to a practical which teaches students how to apply representation and transfer learning methods to biological images.

   Jupyter Notebook 3 1

5. data_analysis_workshop data_analysis_workshop Public

   This repository introduces students to the python programming language and some basics in data analysis.

   Jupyter Notebook