Refactor InferelatorJL + add evaluation pipeline#1

Merged

sheyiphunmi merged 16 commits intomainfrom

Apr 15, 2026

Commits on Mar 29, 2026

Initial commit: refactored Inferelator codebase
Seyifunmi Owoeye
committed
Add evaluation pipeline (R-based GRN benchmarking tools)
Seyifunmi Owoeye
committed
Merge remote-tracking branch 'origin/main' into dev-refactor
Seyifunmi Owoeye
committed
Refactor GRN module: rename combineGRN → aggregateNetworks, combineGRN2 → refineTFA for clarity
Seyifunmi Owoeye
committed
Refactor GRN module: rename combineGRN → aggregateNetworks, combineGRN2 → refineTFA for clarity
sheyiphunmi
committed

Commits on Mar 30, 2026

Bringing codebase closer to publication
sheyiphunmi
committed

Commits on Mar 31, 2026

Updated gitignore file
sheyiphunmi
committed

Commits on Apr 6, 2026

Commits on Apr 15, 2026