Add: R (.r/.R) language support via bespoke extract_r#1

Open

Sirhan1 wants to merge 42 commits into

perf/single-pass-query-scoringfrom

feat/r-language-support

Commits on Jul 14, 2026

fix(detect): scope nested ignore patterns to their own subtree (#1873)

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test(watch): pin update-with-nested-gitignore (#1880); changelog for #1873/#1880

safishamsi
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fix(cargo): honor `package = "..."` rename when resolving internal deps (#1858)

thejesh23
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fix(watch): preserve semantic edges of re-extracted sources (#1865)

xor-xe
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docs(changelog): record #1865 and #1858 in the unreleased 0.9.16 section

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fix(dedup): let the defining file win an ID collision, and warn only about real loss

bchan84x
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fix(dedup): deterministic collision survivor + bare-file definer (#1851 followup)

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fix(exclude): persist --exclude so rebuilds re-apply it (#1886)

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fix(extract): resolve Python module-qualified calls to calls edges (#1883)

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test(watch): pin update discovers newly-added files/dirs (#1837)

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fix(cli): send missing-skill warning to stderr

Mzt00
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fix(extract): recognize uppercase TypeScript

xkam7ar
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fix(extract): filter Kotlin builtin/stdlib types from references graph

kebwlmbhee
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safishamsi
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docs(changelog): record #1881, #1876, #1893 in the unreleased 0.9.16 section

safishamsi
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fix(extract): close residual absolute-path/username leaks (#1899)

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fix(llm): reconcile dispatched vs returned files in semantic extract (#1890)

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docs(changelog): date 0.9.16 for release

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docs(readme): point star-history at Graphify-Labs org; X handle to @graphify

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fix: correct postgres install hint to graphifyy (#1906); classify .skill files as documents (#1901)

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fix(serve): drop German and Romance question stopwords from query terms (#1900)

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fix(export): prune orphaned Obsidian notes on re-export (#1896)

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Fix spurious hooksPath warning and register graph.json merge driver

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fix(llm): drop out-of-scope nodes from the merged extraction result (#1895)

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fix(cli): stamp freshly-extracted semantic docs in the manifest (#1897)

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chore: open 0.9.17 with 8 batch fixes (#1895 #1897 #1902 #1907 #1896 #1900 #1901 #1906)

safishamsi
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Commits on Jul 15, 2026