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Executing a blast against its own sequences database

tranchant edited this page Mar 10, 2017 · 1 revision


Description

This page describes how blast sequences against its own sequences database.

We need, in this tutorial:

  • a fasta file that contains sequences to blast
  • a fasta file corresponding to the sequence database used for the nlast

Author(s)

Authors Christine Tranchant-Dubreuil
Research Unit UMR DIADE
Institut

Keywords

makeblastdbcmd, blastn, blastx, tblastn, tblastx

Files format

fasta

Date

10/03/2017


Summary


Formating sequence database

[tranchant@master0 ~]$ blablabla

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