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  • Florida Bureau of Public Health Laboratories
  • Puerto Rico

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Achievement: Pull Shark

Achievements

Achievement: Pull Shark

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@BPHL-Molecular

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arodzh-sudo/README.md

👨‍💻 Arnold Rodríguez-Hilario

Bioinformatician | Public Health Enthusiast | Microbial Genomics Specialist

👋 Hi, I’m Arnold Rodríguez-Hilario, a Public Health Bioinformatician at the Florida Bureau of Public Health Laboratories. With a background in microbiology, molecular biology, and bioinformatics, I leverage computational tools to improve public health surveillance and pathogen detection.

🔬 Interests

  • 🦠 Pathogen Genomics: From viral genomes to bacterial resistance, I love diving deep into microbial data.
  • 🌎 Public Health Applications: Using genomic insights to combat infectious diseases and improve health outcomes.
  • 🧬 Molecular Biology & Metagenomics: Decoding complex microbial communities and their interactions.

🤝 Collaboration

I’m eager to collaborate on:

  • Pathogen Genomics Pipelines: Streamlining workflows with Python and Nextflow using containerization (Singularity) for reproducibility and scalability.
  • Genomic Epidemiology: Exploring outbreak dynamics and evolutionary trends using genome data.
  • Metagenomic Analysis: Identifying and characterizing microbial communities in diverse environments.

Pinned Loading

  1. nextstrain.org nextstrain.org Public

    Forked from nextstrain/nextstrain.org

    The Nextstrain website

    JavaScript

  2. StaPH-B/docker-builds StaPH-B/docker-builds Public

    📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics

    Dockerfile 223 137

  3. BPHL-Molecular/Juno BPHL-Molecular/Juno Public

    Florida's BPHL Nextflow pipeline for OROV genome assembly.

    Nextflow 1 1

  4. BPHL-Molecular/Sanibel BPHL-Molecular/Sanibel Public

    FL BPHL's Nextflow pipeline for bacterial WGS quality control, identification, species typing and AMR detection

    Python 6 2