Aquaphotomics Summer School 2023 - "Make Aquaphotomics easy - available tools"

This is the demo data resp. the course material showcasing some of the functions of the R-package aquap2. It was introduced at the Aquaphotomics Summer School at the The 3rd European Aquaphotomics Symposium in Rome in September 2023.

Getting Started

• Download this repository or clone it to a local drive. Do this by clicking the green button (towards top middle/right) that says <>Code, then click Download ZIP.
• Unzip, open folder.
• Start either the R-Studio project file (!!Start.Rproj in aquap2_course_Rome2023@home) or set the folder aquap2_course_Rome2023@home as R working directory.
• copy the file externalFiles/TempCalib_XDS into the settings-home directory. (see ?updateSettings in aquap2)
• Execute the code in the folder aquap2_course_Rome2023@home/R-code.

Additional Files

• Please also download the folder AdditionalFiles (from Google Drive).
• It contains a presentation (in PPTX and PDF) with some key-elements of the graphics produced with the code of this course, and some scientific literature that you might consider reading.

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Previous Course

Here you can also look at the course material provided for the The 3rd Aquaphotomics Symposium in Japan, December 2018.