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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -194,3 +194,4 @@ dmypy.json
194194# Pyre type checker
195195.pyre /
196196
197+ .bash_history
Original file line number Diff line number Diff line change 11==================
22BioPython-Convert
33==================
4+
45Interconvert various file formats supported by BioPython.
5- ---------------------------------------------------------
6+
67Supports querying records with JMESPath.
78
89Installation
@@ -50,6 +51,9 @@ Examples:
5051 [0]
5152
5253
54+ See CONTRIBUTING.rst _ for information on contributing to this repo.
55+
56+ .. _CONTRIBUTING.rst : CONTRIBUTING.rst
5357.. _JMESPath : http://jmespath.org/
5458.. _SeqRecord : https://biopython.org/DIST/docs/api/Bio.SeqRecord.SeqRecord-class.html
5559.. _constructor parameters : https://biopython.org/DIST/docs/api/Bio.SeqRecord.SeqRecord-class.html#__init__
Original file line number Diff line number Diff line change 11"""
22Unit tests
3- """
4-
5- from .test_convert import *
3+ """
Load Diff This file was deleted.
Original file line number Diff line number Diff line change @@ -12,7 +12,7 @@ class TestConvert(TestCase):
1212 basic_hash = '2808187bb8e2231545e4d2d7a27dc802df4d1f7c0e953a8399300b2df6b0c737'
1313 convert_type = 'embl'
1414 convert_hash = '5598cb679f5f6c31349968ddde3646fe97296da42ee528ed3f46dec3f5490cbd'
15- info_hash = 'a611656c5a7e7f719c3d64f6b348b67c1abcb8ed56fa82f51fc90cbe2125e5f0 '
15+ info_hash = '91c19f7a3e3ed3f8e55a0d76289a881208cef78f4124edb0c3335e581ea6e48c '
1616 filter = '[?!(features[?type==`source`].qualifiers.plasmid)]'
1717 record_hash = ('8d02b2087c4cea42da7c5f0a69b7a40d544d953c1a9d611b97bd116cc1f8cd7f' ,
1818 'e37ecc4288ae8b2c3bea25484326a69ced9679fa791162ed593064fdf535944d' ,
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