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Fix/local history bugs - #61
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…fety * Implement `LocalHistoryBatchReader` in `FileLocalHistoryStore` to batch read revisions and optimize search performance. * Persist document identities independently in `documents.json` and improve unindexed capture handling during index recovery. * Add `_LocalHistoryLossProtection` checks to guard entity deletions and external replacements against concurrent disk changes. * Refactor local history restore flows in comparison and workspace controllers with recovery state tracking, workspace navigation prompts, and final newline policy matching. * Observe external and authoritative note replacements separately using `LocalHistoryCaptureReason.externalChange`.
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