Develop

cwl-workflow/pattern-1-inputs.json

@@ -0,0 +1,9 @@
+{
+    "aoi": "-118.985,38.432,-118.183,38.938",
+    "epsg": "EPSG:4326",
+    "bands": ["green", "nir08"],
+    "item": {
+        "class": "https://raw.githubusercontent.com/eoap/schemas/main/url.yaml#URL",
+        "value": "https://planetarycomputer.microsoft.com/api/stac/v1/collections/landsat-c2-l2/items/LC08_L2SP_042033_20231007_02_T1"
+    }
+}

cwl-workflow/pattern-1.cwl

@@ -1,56 +1,88 @@
 cwlVersion: v1.0
+schemas:
+- http://schema.org/version/9.0/schemaorg-current-http.rdf
 $namespaces:
   s: https://schema.org/
+  eoap: "http://oeap.github.io/schema#"
 
-schemas:
-  - http://schema.org/version/9.0/schemaorg-current-http.rdf
-
-s:softwareVersion: 1.0.0
-
-s:applicationCategory: "Earth Observation application package"
-s:additionalProperty:
-  - s:@type: s:PropertyValue
-    s:name: application-type
-    s:value: delineation
-  - s:@type: s:PropertyValue
-    s:name: domain
-    s:value: hydrology
+s:name: Water bodies detection based on NDWI and the otsu threshold
+s:description: Water bodies detection based on NDWI and otsu threshold applied to a single Landsat-8/9 acquisition.
+s:dateCreated: '2025-01-01'
+s:license:
+  '@type': s:CreativeWork
+  s:identifier: Apache-2.0
 
-s:thumbnail: 
-  s:@type: s:ImageObject
-  s:contentUrl: "https://s3.waw3-2.cloudferro.com/swift/v1/stac-png/S2_L2A.jpg"
-  s:caption: "Water bodies detected based on the NDWI and otsu threshold"
-  s:encodingFormat: "image/jpeg"
-  s:height: "360"
-  s:width: "640"
+s:keywords:
+- CWL
+- Workflow
+- Earth Observation
 
+s:operatingSystem:
+- Linux
+- macOS
+s:softwareRequirements:
+- https://cwltool.readthedocs.io/en/latest/
+- https://www.python.org/
 
-s:license:
-  s:@type: s:CreativeWork
-  s:name: "License CC BY 4.0"
-  s:url: "https://creativecommons.org/licenses/by/4.0/"
-  s:encodingFormat: "text/html"
+s:softwareVersion: 1.0.0
+s:softwareHelp:
+- '@type': s:CreativeWork
+  s:name: User Manual
+  s:url: tps://eoap.github.io/application-package-patterns/
 
-s:documentation:
-  - s:@type: s:CreativeWork
-    s:name: "User Manual"
-    s:url: "https://eoap.github.io/application-package-patterns/"
-    s:encodingFormat: "text/html"
+s:publisher:
+  '@type': s:Organization
+  s:name: Make Earth Observation Great Again
+  s:email: info@meoga.com
+  s:identifier: https://ror.org/9999cx000
 
 s:author:
-  s:@type: s:Person
-  s:name: "John Doe"
+- '@type': s:Role
+  s:roleName: Project Manager
+  s:additionalType: http://purl.org/spar/datacite/ProjectManager
+  s:author:
+    '@type': s:Person
+    s:givenName: Lois
+    s:familyName: Lane
+    s:email: lois.lane@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+- '@type': s:Role
+  s:roleName: Researcher
+  s:additionalType: http://purl.org/spar/datacite/Researcher
+  s:author:
+    '@type': s:Person
+    s:givenName: Clark
+    s:familyName: Kent
+    s:email: clark.kent@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+
+s:contributor:
+- '@type': s:Person
+  s:givenName: Lex
+  s:familyName: Luthor
+  s:email: lex.luthor@luthorcorp.com
+  s:identifier: https://orcid.org/0000-9999-0000-9999
   s:affiliation:
-    s:@type: s:Organization
-    s:name: "Make EO Great Again Platform"
-  s:email: "john.doe@meogap.org"
-  
+    '@type': s:Organization
+    s:name: Luthor Corp
+    s:identifier: https://ror.org/0000cx000 
+
 $graph:
   - class: Workflow
     id: pattern-1
     label: Water bodies detection based on NDWI and the otsu threshold
     doc: Water bodies detection based on NDWI and otsu threshold applied to a single Landsat-8/9 acquisition
     requirements: []
+    hints:
+    - class: eoap:JSONSchemaHint
     inputs:
       aoi:
         label: area of interest

cwl-workflow/pattern-10-inputs.json

@@ -0,0 +1,15 @@
+{
+    "aoi": "-118.985,38.432,-118.183,38.938",
+    "epsg": "EPSG:4326",
+    "indexes": ["ndvi", "ndwi"],
+    "items": [
+        {
+            "class": "https://raw.githubusercontent.com/eoap/schemas/main/url.yaml#URL",
+            "value": "https://planetarycomputer.microsoft.com/api/stac/v1/collections/landsat-c2-l2/items/LC08_L2SP_042033_20231007_02_T1"
+        },
+        {
+            "class": "https://raw.githubusercontent.com/eoap/schemas/main/url.yaml#URL",
+            "value": "https://planetarycomputer.microsoft.com/api/stac/v1/collections/landsat-c2-l2/items/LC09_L2SP_042033_20231015_02_T1"
+        }
+    ]
+}

cwl-workflow/pattern-10.cwl

@@ -6,21 +6,83 @@
 
 # This scenario takes as input an array of acquisition, applies an algorithm to each of them. 
 
-
 cwlVersion: v1.0
+schemas:
+- http://schema.org/version/9.0/schemaorg-current-http.rdf
 $namespaces:
   s: https://schema.org/
+  eoap: "http://oeap.github.io/schema#"
+
+s:name: NDVI and NDWI vegetation indexes
+s:description: NDVI and NDWI vegetation indexes from Landsat-8/9 acquisitions.
+s:dateCreated: '2025-01-01'
+s:license:
+  '@type': s:CreativeWork
+  s:identifier: Apache-2.0
+
+s:keywords:
+- CWL
+- Workflow
+- Earth Observation
+
+s:operatingSystem:
+- Linux
+- macOS
+s:softwareRequirements:
+- https://cwltool.readthedocs.io/en/latest/
+- https://www.python.org/
+
 s:softwareVersion: 1.0.0
-s:applicationCategory: "Earth Observation application package"
-s:additionalProperty:
-  - s:@type: s:PropertyValue
-    s:name: application-type
-    s:value: vegetation-index
-  - s:@type: s:PropertyValue
-    s:name: domain
-    s:value: agriculture
-schemas:
-  - http://schema.org/version/9.0/schemaorg-current-http.rdf
+s:softwareHelp:
+- '@type': s:CreativeWork
+  s:name: User Manual
+  s:url: tps://eoap.github.io/application-package-patterns/
+
+s:publisher:
+  '@type': s:Organization
+  s:name: Make Earth Observation Great Again
+  s:email: info@meoga.com
+  s:identifier: https://ror.org/9999cx000
+
+s:author:
+- '@type': s:Role
+  s:roleName: Project Manager
+  s:additionalType: http://purl.org/spar/datacite/ProjectManager
+  s:author:
+    '@type': s:Person
+    s:givenName: Lois
+    s:familyName: Lane
+    s:email: lois.lane@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+- '@type': s:Role
+  s:roleName: Researcher
+  s:additionalType: http://purl.org/spar/datacite/Researcher
+  s:author:
+    '@type': s:Person
+    s:givenName: Clark
+    s:familyName: Kent
+    s:email: clark.kent@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+
+s:contributor:
+- '@type': s:Person
+  s:givenName: Lex
+  s:familyName: Luthor
+  s:email: lex.luthor@luthorcorp.com
+  s:identifier: https://orcid.org/0000-9999-0000-9999
+  s:affiliation:
+    '@type': s:Organization
+    s:name: Luthor Corp
+    s:identifier: https://ror.org/0000cx000 
+
 $graph:
   - class: Workflow
     id: pattern-10
@@ -29,6 +91,8 @@ $graph:
     requirements:
       SubworkflowFeatureRequirement: {}
       ScatterFeatureRequirement: {}
+    hints:
+    - class: eoap:JSONSchemaHint
     inputs:
       aoi:
         label: area of interest
@@ -62,6 +126,8 @@ $graph:
     steps:
       subworkflow:
         run: "#vegetation_indexes"
+        label: Compute vegetation indexes
+        doc: Compute NDVI and NDWI vegetation indexes from the Landsat-8/9 acquisitions
         in:
           item: items
           aoi: aoi
@@ -75,6 +141,8 @@ $graph:
 
       flatten:
         run: "#flatten_array"
+        label: Flatten Directory[][] → Directory[]
+        doc: Flatten the nested array of Directories into a single array
         in:
           nested: subworkflow/vegetation_indexes
         out:

cwl-workflow/pattern-11-inputs.json

@@ -0,0 +1,13 @@
+{
+    "aoi": "-118.985,38.432,-118.183,38.938",
+    "epsg": "EPSG:4326",
+    "bands": ["green", "nir08"],
+    "item": {
+        "class": "https://raw.githubusercontent.com/eoap/schemas/main/url.yaml#URL",
+        "value": "https://planetarycomputer.microsoft.com/api/stac/v1/collections/landsat-c2-l2/items/LC08_L2SP_042033_20231007_02_T1"
+    },
+    "dem": {
+        "class": "https://raw.githubusercontent.com/eoap/schemas/main/url.yaml#URL",
+        "value": "https://elevationeuwest.blob.core.windows.net/copernicus-dem/COP30_hh/Copernicus_DSM_COG_10_N38_00_W119_00_DEM.tif"
+    }
+}

cwl-workflow/pattern-11.cwl

@@ -1,23 +1,88 @@
 cwlVersion: v1.0
+schemas:
+- http://schema.org/version/9.0/schemaorg-current-http.rdf
 $namespaces:
   s: https://schema.org/
+  eoap: "http://oeap.github.io/schema#"
+
+s:name: Water bodies detection based on NDWI and the otsu threshold (with DEM)
+s:description: Water bodies detection based on NDWI and otsu threshold applied to a single Landsat-8/9 acquisition.
+s:dateCreated: '2025-01-01'
+s:license:
+  '@type': s:CreativeWork
+  s:identifier: Apache-2.0
+
+s:keywords:
+- CWL
+- Workflow
+- Earth Observation
+
+s:operatingSystem:
+- Linux
+- macOS
+s:softwareRequirements:
+- https://cwltool.readthedocs.io/en/latest/
+- https://www.python.org/
+
 s:softwareVersion: 1.0.0
-s:applicationCategory: "Earth Observation application package"
-s:additionalProperty:
-  - s:@type: s:PropertyValue
-    s:name: application-type
-    s:value: delineation
-  - s:@type: s:PropertyValue
-    s:name: domain
-    s:value: hydrology
-schemas:
-  - http://schema.org/version/9.0/schemaorg-current-http.rdf
+s:softwareHelp:
+- '@type': s:CreativeWork
+  s:name: User Manual
+  s:url: tps://eoap.github.io/application-package-patterns/
+
+s:publisher:
+  '@type': s:Organization
+  s:name: Make Earth Observation Great Again
+  s:email: info@meoga.com
+  s:identifier: https://ror.org/9999cx000
+
+s:author:
+- '@type': s:Role
+  s:roleName: Project Manager
+  s:additionalType: http://purl.org/spar/datacite/ProjectManager
+  s:author:
+    '@type': s:Person
+    s:givenName: Lois
+    s:familyName: Lane
+    s:email: lois.lane@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+- '@type': s:Role
+  s:roleName: Researcher
+  s:additionalType: http://purl.org/spar/datacite/Researcher
+  s:author:
+    '@type': s:Person
+    s:givenName: Clark
+    s:familyName: Kent
+    s:email: clark.kent@dailyplanet.com
+    s:identifier: https://orcid.org/0000-9999-0000-9999
+    s:affiliation:
+      '@type': s:Organization
+      s:name: Daily Planet
+      s:identifier: https://ror.org/0000cx000
+
+s:contributor:
+- '@type': s:Person
+  s:givenName: Lex
+  s:familyName: Luthor
+  s:email: lex.luthor@luthorcorp.com
+  s:identifier: https://orcid.org/0000-9999-0000-9999
+  s:affiliation:
+    '@type': s:Organization
+    s:name: Luthor Corp
+    s:identifier: https://ror.org/0000cx000 
+
 $graph:
   - class: Workflow
     id: pattern-11
     label: Water bodies detection based on NDWI and the otsu threshold (with DEM)
     doc: Water bodies detection based on NDWI and otsu threshold applied to a single Landsat-8/9 acquisition
     requirements: []
+    hints:
+    - class: eoap:JSONSchemaHint
     inputs:
       aoi:
         label: area of interest
@@ -52,6 +117,8 @@ $graph:
     steps:
       step:
         run: "#clt"
+        label: Detect water bodies
+        doc: Detect water bodies based on the NDWI and otsu threshold from Landsat-8/9 acquisition and DEM
         in:
           item: item
           aoi: aoi