Gas enclosure tutorials#179
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Document that this repo is a Jupyter Book tutorial (not a package), the conda-based build, the two executable page formats (.ipynb and MyST .md), and the force-execution / fail_on_warning build constraints. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Cover the new gas-enclosure feature set from FESTIM v2.2-rc.1: New "Gas enclosures" fundamentals part (book/content/gas_enclosures/): - index: the pressure-as-unknown concept and governing balance - enclosure_intro: flux coupling via SurfaceReactionBC, exact conservation check - coupling: Dirichlet coupling (SievertsBC/HenrysBC), TMAP analytical verification - openings: Pump, Reservoir, PrescribedFlowRate, EnclosureConnection, each verified against its closed-form solution - geometries: discontiguous 1D meshes and a 2D quarter-circle enclosure New application task11: pumped-interspace double-membrane permeation barrier, built on a discontiguous Mesh1D with a Pump on the shared enclosure. Also introduce F.plot (post_process/pyvista), species-dependent input values (boundary_conditions/h_transport_advanced), and the configurable milestone tolerance (misc/stepsize). environment.yml: pin festim==2.2rc1 via pip (not yet on conda-forge) on a fenics-dolfinx>=0.11 base, with scifem/io4dolfinx as conda deps. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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