Releases: galaxyproject/planemo
Releases · galaxyproject/planemo
0.75.41
What's Changed
- Fix workflow lint crash when tool_state is dict instead of JSON string by @jmchilton in #1626
Full Changelog: 0.75.40...0.75.41
0.75.40
What's Changed
- Support new path for galaxy's version file by @mr-c in #1624
- Enable GxITs in planemo serve by @pavanvidem in #1568
Full Changelog: 0.75.39...0.75.40
0.75.39
What's Changed
- Add planemo format command by @dannon in #1617
- Bump actions/download-artifact from 7 to 8 by @dependabot[bot] in #1622
- Bump actions/upload-artifact from 6 to 7 by @dependabot[bot] in #1623
- Add --job_workers option to limit parallel local jobs (default 1) by @mvdbeek in #1620
New Contributors
Full Changelog: 0.75.38...0.75.39
0.75.38
What's Changed
- Display job metric container in test results by @mvdbeek in #1612
- Accept completed as terminal invocation state by @mvdbeek in #1615
- Added testing with index by @dadrasarmin in #1614
- Speed up planemo tests by providing uv by @mvdbeek in #1616
- Replace distutils (removed in Python 3.12) by @nsoranzo in #1618
- Test (cleanup) improvements by @mvdbeek in #1619
New Contributors
- @dadrasarmin made their first contribution in #1614
Full Changelog: 0.75.37...0.75.38
0.75.37
What's Changed
- Move deploy to a separate workflow for trusted publishing by @nsoranzo in #1608
- Finish release and fix release process by @bernt-matthias in #1607
- Set default mulled_resolution_cache_data_dir in planemo workspace by @mvdbeek in #1610
- Fix commit_version.py by @bernt-matthias in #1609
Full Changelog: 0.75.36...0.75.37
0.75.36
What's Changed
- Add new pangenomics category by @SaimMomin12 in #1603
- Fix exception handling in case of ReadTimeout errors by @nsoranzo in #1606
- Apply new black formatting by @mvdbeek in #1605
- Fix error in reports macro file by @bernt-matthias in #1604
- Add linter checking remote_repository_url by @bernt-matthias in #1581
New Contributors
- @SaimMomin12 made their first contribution in #1603
Full Changelog: 0.75.35...0.75.36
0.75.35
What's Changed
- Allow to skip url check by @bernt-matthias in #1597
- add response to error message by @bernt-matthias in #1598
- Add vault configuration file option by @arash77 in #1599
- Add documentation for workflow_track, invocation_download, and invoca… by @mvdbeek in #1601
Full Changelog: 0.75.34...0.75.35
0.75.34
What's Changed
- Bump actions/setup-node from 5 to 6 by @dependabot[bot] in #1582
- Use job cache in planemo rerun by @mvdbeek in #1583
- Bump actions/checkout from 5 to 6 by @dependabot[bot] in #1586
- Some refactoring and fixes for handing of conda packages by @bernt-matthias in #1592
- Fix for method that is renamed in 25.1 by @bernt-matthias in #1591
- Allow
requirements_in_condaandbiocontainer_registeredin skip_file by @kostrykin in #1588 - Expand failed workflow jobs by default and sort steps numerically by @mvdbeek in #1594
- Make output of planemo workflow_job_init more helpful by @mvdbeek in #1595
- Implement upload progress bar by @mvdbeek in #1593
- Add TRS ID support for
runandworkflow_job_initby @mvdbeek in #1596
Full Changelog: 0.75.33...0.75.34
0.75.33
What's Changed
- Build and release script updates by @mvdbeek in #1561
- Fix underscores in config option by @bernt-matthias in #1567
- Enable dependabot version updates for GitHub actions by @nsoranzo in #1566
- Bump actions/checkout from 4 to 5 by @dependabot[bot] in #1569
- Bump actions/setup-python from 5 to 6 by @dependabot[bot] in #1570
- Bump actions/setup-node from 4 to 5 by @dependabot[bot] in #1571
- Updates to
pyproject.tomland CI workflows by @nsoranzo in #1572 - Wait for upload job and make sure uploads are ok by @mvdbeek in #1574
- Raise click exception where we don't need a full traceback by @mvdbeek in #1577
- Fall back to sqlite when database creation fails by @mvdbeek in #1576
- Improve command not found handling by @mvdbeek in #1575
- Delay toil import and use or fail when actually used by @mvdbeek in #1580
- Don't report failed workflow run with --no_wait by @mvdbeek in #1579
- Fail when pointing at a profile that doesn't exist by @mvdbeek in #1578
Full Changelog: 0.75.32...0.75.33