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Heinig lab

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  1. scPower scPower Public

    Experimental design framework for scRNAseq population studies (eQTL and DE)

    R 46 5

  2. hawe2021_meQTL_analyses hawe2021_meQTL_analyses Public

    Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics

    R 14 6

  3. DCM_heart_cell_atlas DCM_heart_cell_atlas Public

    Single cell atlas of the hearts of patients with dilated cardiomyopathy

    Jupyter Notebook 11 3

  4. DeepSom DeepSom Public

    Forked from sergeyvilov/DeepSom

    A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal

    Python 11 3

  5. stemi_mofa stemi_mofa Public

    Multiomics factor analysis of STEMI patients

    Jupyter Notebook 8 3

  6. symatrial symatrial Public

    Analysis code for the symatrial project

    HTML 7 4

Repositories

Showing 10 of 20 repositories
  • cardiogenic_shock_mofa Public

    This repository contains the data, code, and figures for the cardiogenic shock manuscript linked here:

    heiniglab/cardiogenic_shock_mofa’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 27, 2026
  • heiniglab/plaque-atlas-mapping’s past year of commit activity
    Python 3 0 0 0 Updated Jan 29, 2026
  • heiniglab/reproducibility-plaque-atlas’s past year of commit activity
    Jupyter Notebook 5 0 0 0 Updated Jan 29, 2026
  • heiniglab.github.io Public

    Heinig lab website

    heiniglab/heiniglab.github.io’s past year of commit activity
    0 0 0 0 Updated Jan 28, 2026
  • investigating-foundation-models-3utr Public Forked from sergeyvilov/investigating-foundation-models-3utr

    data processing codes for "Investigating the performance of foundation models on human 3’UTR sequences"

    heiniglab/investigating-foundation-models-3utr’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 0 0 Updated Oct 15, 2025
  • heiniglab/scPower-Cell-Atlas’s past year of commit activity
    R 0 0 15 0 Updated Jan 13, 2025
  • scPower Public

    Experimental design framework for scRNAseq population studies (eQTL and DE)

    heiniglab/scPower’s past year of commit activity
    R 46 5 4 0 Updated Jan 8, 2025
  • stride Public

    STRIDE protein secondary structure assignment

    heiniglab/stride’s past year of commit activity
    C 1 2 0 0 Updated Jul 30, 2024
  • mofa_workflow Public

    Workflow for processing and analyzing multi-omics data with MOFA

    heiniglab/mofa_workflow’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated Jun 27, 2024
  • stemi_mofa Public

    Multiomics factor analysis of STEMI patients

    heiniglab/stemi_mofa’s past year of commit activity
    Jupyter Notebook 8 3 0 0 Updated Mar 4, 2024

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