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kakyungkim/README.md

👋 About Me

I am a clinical bioinformatics specialist with 20+ years of experience across academia and industry, focusing on translating genomics data into clinical applications.

My work bridges bioinformatics, clinical research, and AI — from multi-omics analysis to automated interpretation pipelines.

🔬 Key Areas

  • Multi-platform NGS analysis (WES, RNA-seq, scRNA-seq, liquid biopsy)
  • Multi-omics integration for biomarker discovery
  • Clinical data analysis (Ph1–3) & regulatory-compliant workflows (GCLP/CAP/ISO)

🤖 AI & Automation

  • LLM-based variant interpretation pipeline
  • RAG/Agent workflows for automated analysis
  • Clinical report automation systems

🚀 Featured Projects

  • scRNA-seq End-to-End Pipeline
  • LLM-based Variant Interpretation Pipeline
  • AI Agent for Clinical Report Interpretation

📫 Contact

LinkedIn: (https://www.linkedin.com/in/kakyungkim/)

Popular repositories Loading

  1. kakyungkim kakyungkim Public

    Config files for my GitHub profile.

  2. first-repository first-repository Public

    Jupyter Notebook

  3. first-fork first-fork Public

    Forked from ez4happy/first-repository

    Jupyter Notebook

  4. aiffel aiffel Public

    Jupyter Notebook

  5. kakyungkim_portfolio kakyungkim_portfolio Public

    Forked from dongchanlim/portfolio_template

    This is Ka-Kyung Kim's portfolio

  6. kakyungkim.github.io kakyungkim.github.io Public

    Personal research and tech blog

    SCSS