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DNA counts differ between conditions that use the same DNA FASTQ file

Status: Open.

#226 In kircherlab/MPRAsnakeflow;

· graceoualline opened on Oct 10, 2025

Github action creating docker images

Status: Open.

Task

#171 In kircherlab/MPRAsnakeflow;

· visze opened on Jan 23, 2025

Script unit tests

Status: Open.

#170 In kircherlab/MPRAsnakeflow;

· visze opened on Jan 22, 2025

Snakemake workflow tests

Status: Open.

#169 In kircherlab/MPRAsnakeflow;

· visze opened on Jan 22, 2025

All in one docker image

Status: Open.

Task

#168 In kircherlab/MPRAsnakeflow;

· visze opened on Jan 22, 2025

Limit number of replicates per condition

Status: Open.

Task

#167 In kircherlab/MPRAsnakeflow;

· visze opened on Jan 16, 2025

add an option to use the revese complement BC within experiment workflow

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#88 In kircherlab/MPRAsnakeflow;

· visze opened on Nov 30, 2023

replace MergeTrimReadsBAM.py

Status: Open.

#57 In kircherlab/MPRAsnakeflow;

· visze opened on May 19, 2022