genesis v0.34.0

Notable changes

• sequence
  • Add Fai Input Stream
  • Add experimental Kmer Color Gamut (color set) functions
  • Add experimental approaches for kmer colors from Taxonomy
• taxonomy
  • Add Taxonomy to Tree function with node associations
  • Add experimental functions for Taxonomy partitioning
  • Improve Accession Lookup Reader speed and fault tolerance
• utils
  • strings
    • Add Lightweight String class
    • Add and refactor string split function overloads
  • bits
    • Add Bitvector set functions
    • Add bit trailing/leading count functions
  • threading
    • Add Serial Task Queue
    • Add throttled parallel for loop helpers
  • misc
    • Add Resource Logger helper class
    • Add Matrix serialization

Build

• Upgrade to CMake >= 3.8
• Move bit and bitvector files

Bug fixes

• Fix missing header include in test
• Fix Csv Input Iterator range based for loop
• Several smaller bug fixes and compiler issues