Search results

find_homolog_genes.py errors without explanation

Status: Open.

#233 In ndaniel/fusioncatcher;

· anoronh4 opened on Oct 12, 2025

fusioncatcher on Gencode human reference

Status: Open.

#231 In ndaniel/fusioncatcher;

· tkcaccia opened on Jun 24, 2025

find_homolog_genes.py takes a very long time

Status: Open.

#230 In ndaniel/fusioncatcher;

· bounlu opened on Jun 12, 2025

cases where gene1 and gene 2 have 2 matches

Status: Open.

#229 In ndaniel/fusioncatcher;

· ieiedm opened on Jun 11, 2025

Long lists of candidate fusions when read length exceeds 100 bp

Status: Open.

#228 In ndaniel/fusioncatcher;

· Rmulet opened on Mar 27, 2025

Fusions between unannotated transcribed DNA regions

Status: Open.

#227 In ndaniel/fusioncatcher;

· balayev1 opened on Dec 6, 2024

Multiple version of MySQL on ensembl FTP causes error in get_synonyms.py

Status: Open.

#226 In ndaniel/fusioncatcher;

· ktmf1991 opened on Dec 6, 2024

How to output FusionCatcher predicted gene fusions in BEDPE format?

Status: Open.

#225 In ndaniel/fusioncatcher;

· SysLuke opened on Nov 8, 2024

feature request: report transcripts

Status: Open.

#224 In ndaniel/fusioncatcher;

· anoronh4 opened on Oct 31, 2024

Issue Encountered While Running FusionCatcher

Status: Open.

#223 In ndaniel/fusioncatcher;

· WANGW-z opened on Aug 20, 2024

Predicted_fused_transcripts and Predicted_fused_proteins columns are missing

Status: Open.

#222 In ndaniel/fusioncatcher;

· makarov-ccf opened on Aug 6, 2024

Error downloading Canis lupus familiaris genome from Ensembl

Status: Open.

#221 In ndaniel/fusioncatcher;

· SeungWWoo opened on Aug 6, 2024