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    • A collection of public LabKey modules developed by the Bimber Lab
      HTML
      5491Updated Apr 22, 2026Apr 22, 2026
    • nimbleR

      Public
      Contains helper functions to append nimble data to Seurat objects
      R
      0000Updated Apr 14, 2026Apr 14, 2026
    • DISCVRSeq

      Public
      A collection of command line tools for working with sequencing data
      HTML
      Apache License 2.0
      165201Updated Apr 14, 2026Apr 14, 2026
    • RIRA

      Public
      The Rhesus Immune Reference Atlas: multi-tissue scRNA-seq atlas and code for cell type/state classification
      R
      31200Updated Apr 13, 2026Apr 13, 2026
    • cellhashR

      Public
      An R package designed to demultiplex cell hashing data
      R
      83100Updated Apr 10, 2026Apr 10, 2026
    • nimble

      Public
      nimble — execute lightweight, flexible alignments on custom reference libraries
      Python
      MIT License
      0240Updated Jan 21, 2026Jan 21, 2026
    • nimble-aligner is the backend for nimble, a tool that executes lightweight, flexible alignments to generate supplemental alignment data
      Rust
      MIT License
      1230Updated Jan 16, 2026Jan 16, 2026
    • Bimber Lab Site
      Apache License 2.0
      1100Updated Feb 11, 2025Feb 11, 2025
    • This holds npm packages designed to support DISCVR web applications
      JavaScript
      Apache License 2.0
      0043Updated Dec 16, 2024Dec 16, 2024
    • LabKey Server testing infrastructure and helpers
      Java
      9000Updated Dec 22, 2022Dec 22, 2022
    • gene-set enrichment visualization.
      R
      1100Updated Feb 11, 2022Feb 11, 2022
    • discvr-seq

      Public archive
      DISCVR-Seq is a collection of LabKey Server modules to analyze and manage next-generation sequence data
      Dockerfile
      Apache License 2.0
      2100Updated Jan 19, 2020Jan 19, 2020
    • discvr

      Public archive
      DISCVR is an extension to LabKey Server designed to help labs manage data
      Apache License 2.0
      1000Updated Jan 19, 2020Jan 19, 2020
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