Repositories list

• MesquiteCore

  Public
  The core Mesquite repository

  Java

  •

  GNU Lesser General Public License v3.0

  •2929 forks•112112 stars•3737 issues•88 pull requests•Updated Apr 18, 2026Apr 18, 2026

• Cartographer

  Public
  Java

  •00 forks•00 stars•11 issue•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• Mesquite-Zephyr

  Public
  Zephyr is a package for connecting Mesquite to other phylogenetic inference software

  Java

  •22 forks•11 star•00 issues•00 pull requests•Updated Apr 9, 2026Apr 9, 2026

• Mesquite_PDAP

  Public
  The PDAP:PDTREE package for Mesquite

  Java

  •

  GNU Lesser General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Nov 3, 2025Nov 3, 2025

• Chromaseq

  Public
  A package for processing chromatograms and making base calls

  Java

  •

  GNU Lesser General Public License v3.0

  •22 forks•66 stars•11 issue•00 pull requests•Updated Oct 25, 2025Oct 25, 2025

• NINJA_Mesquite

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 26, 2025Jun 26, 2025

• MacClade

  Public
  MacClade 4: Analysis of phylogeny and character evolution

  OpenEdge ABL

  •

  GNU Lesser General Public License v2.1

  •00 forks•44 stars•11 issue•00 pull requests•Updated May 5, 2025May 5, 2025

• TreeSetVis

  Public
  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Feb 23, 2025Feb 23, 2025

• web-scripts

  Public
  Web scripts for server

  11 fork•00 stars•00 issues•00 pull requests•Updated May 7, 2018May 7, 2018

• MesquiteDeveloperDocumentation

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 2, 2018May 2, 2018

• StratigraphicTools

  Public
  Laurin et al.'s stratigraphic tool modules for Mesquite

  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Sep 12, 2017Sep 12, 2017

• sotol

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 6, 2017May 6, 2017

• MesquiteJavaDocs

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 7, 2016Jul 7, 2016

• Opal_Mesquite

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 14, 2014Jul 14, 2014

• MesquiteExamples

  Public
  Example modules for extending Mesquite

  Java

  •

  GNU Lesser General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 5, 2013Dec 5, 2013

• MesquiteArchive

  Public
  Archive of the Subversion repository as of December 4, 2013

  Java

  •

  GNU Lesser General Public License v3.0

  •11 fork•22 stars•00 issues•00 pull requests•Updated Dec 5, 2013Dec 5, 2013