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    • customising-nfcore-workshop-2026

      Public
      Materials for the 2026 delivery of the Customising nf-core Australian BioCommons workshop.
      0042Updated Apr 23, 2026Apr 23, 2026
    • docker-build-phase-testbed

      Public
      Toy docker project for me to play with build phases
      Python
      0000Updated Apr 23, 2026Apr 23, 2026
    • A Nextflow pipeline for processing single cell RNA sequencing data and performing differential expression and functional enrichment analyses.
      GNU General Public License v3.0
      0011Updated Apr 22, 2026Apr 22, 2026
    • proteinfold

      Public
      Protein 3D structure prediction pipeline
      HTML
      MIT License
      68000Updated Apr 22, 2026Apr 22, 2026
    • stats-resources

      Public
      SIH Statistics resources
      HTML
      Other
      4710Updated Apr 22, 2026Apr 22, 2026
    • omeka-s-docker

      Public
      Dockerisation for the Curated Collections distribution of Omeka S
      Dockerfile
      0060Updated Apr 21, 2026Apr 21, 2026
    • shelley-bio

      Public
      Beautiful shelley 🐢
      Python
      0182Updated Apr 21, 2026Apr 21, 2026
    • wasm-bioc-repo-omics-workshop

      Public
      To use binary packages links in webR
      0000Updated Apr 21, 2026Apr 21, 2026
    • CSS
      MIT License
      0102Updated Apr 20, 2026Apr 20, 2026
    • Shell
      0000Updated Apr 19, 2026Apr 19, 2026
    • Forking this to play with adding a sidebar
      JavaScript
      GNU General Public License v3.0
      1070Updated Apr 17, 2026Apr 17, 2026
    • Scalable Nextflow implementation of germline alignment and short variant calling with Parabricks for NCI Gadi HPC.
      Nextflow
      GNU General Public License v3.0
      4861Updated Apr 16, 2026Apr 16, 2026
    • links

      Public
      Url shortener for Sydney Informatics Hub links
      JavaScript
      MIT License
      0000Updated Apr 15, 2026Apr 15, 2026
    • Scripts to pull resource usage data from job logs for Artemis and Gadi into tab-delimited format and to report queue time from job history
      Perl
      0320Updated Apr 15, 2026Apr 15, 2026
    • CSS
      MIT License
      0000Updated Apr 15, 2026Apr 15, 2026
    • nf-gadi

      Public
      Groovy
      Apache License 2.0
      1000Updated Apr 14, 2026Apr 14, 2026
    • Template scripts to automate submission of identical benchmark tasks with increasing compute resources
      Shell
      0110Updated Apr 12, 2026Apr 12, 2026
    • Testing Leaflet maps for Curated Collections
      JavaScript
      0000Updated Apr 9, 2026Apr 9, 2026
    • Data visualisation of UK Hansard data using Observable Framework
      JavaScript
      0000Updated Apr 9, 2026Apr 9, 2026
    • Make your RunAI CLI commands to make workloads on the Sydney GPU Cluster
      JavaScript
      0000Updated Apr 9, 2026Apr 9, 2026
    • ngc-omeka

      Public
      An enduring web publishing platform solution for Humanities, Arts and Social Sciences (HASS) and Indigenous research data collections.
      PHP
      1002Updated Apr 8, 2026Apr 8, 2026
    • User guide for onboarding USyd users to NCI Gadi
      CSS
      MIT License
      1410Updated Apr 7, 2026Apr 7, 2026
    • Experimenting with using Omeka S themes to customise the frontend
      SCSS
      GNU General Public License v3.0
      17000Updated Apr 7, 2026Apr 7, 2026
    • BioShell

      Public
      Shell
      1000Updated Apr 1, 2026Apr 1, 2026
    • Python
      0002Updated Mar 30, 2026Mar 30, 2026
    • Python toolkit for tidying CSVs for Omeka S import
      Python
      0000Updated Mar 30, 2026Mar 30, 2026
    • R
      0100Updated Mar 18, 2026Mar 18, 2026
    • nf4ls-materials

      Public template
      NF4LS trainer materials
      Shell
      Creative Commons Attribution 4.0 International
      10130Updated Mar 16, 2026Mar 16, 2026
    • SIH bioinformatics training
      0000Updated Mar 16, 2026Mar 16, 2026
    • Terraform setup for Curated Collections
      HCL
      0000Updated Mar 16, 2026Mar 16, 2026
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