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@TissueImageAnalytics Tissue Image Analytics (TIA) Centre

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    17 repositories

    • tiatoolbox

      Public
      Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
      pythonmachine-learningdeep-learning
      pythonmachine-learningdeep-learningimage-analysiscell-segmentationdigital-pathologywhole-slide-imagingmedical-image-analysiscomputational-pathologycell-classification
      Python
      •
      Other
      •109•525•5•6•Updated Apr 17, 2026Apr 17, 2026

    • cytomine-hovernet

      Public
      Implementaiton of TIAToolbox's HoVer-Net in Cytomine
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 29, 2026Jan 29, 2026

    • wsic

      Public
      Whole Slide image (WSI) conversion for brightfield histology images
      Python
      •
      MIT License
      •10•1•0•0•Updated Mar 31, 2025Mar 31, 2025

    • cerberus

      Public
      One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
      pythondeep-learningpytorch
      pythondeep-learningpytorchmulti-task-learningcomputational-pathology
      Python
      •
      GNU General Public License v3.0
      •15•102•6•0•Updated Nov 27, 2024Nov 27, 2024

    • iguana

      Public
      Interpretable Gland-Graph Networks
      pythondeep-learningpytorch
      pythondeep-learningpytorchcomputational-pathologypytorch-geometricgraph-neural-network
      Python
      •
      GNU General Public License v3.0
      •4•22•1•1•Updated Mar 7, 2024Mar 7, 2024

    • CoNIC

      Public
      CoNIC Challenge
      Jupyter Notebook
      •19•69•4•0•Updated Feb 19, 2024Feb 19, 2024

    • BRACE-marker

      Public
      Tumour Grade Composition Index
      Python
      •1•1•0•0•Updated Sep 14, 2023Sep 14, 2023

    • tiatoolbox-docker

      Public
      Docker Official Image packaging for Tiatoolbox
      Dockerfile
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Apr 6, 2023Apr 6, 2023

    • tiatoolbox-feedstock

      Public
      A conda-smithy repository for tiatoolbox.
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•0•Updated May 9, 2022May 9, 2022

    • staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5.9k•1•0•0•Updated Jan 20, 2022Jan 20, 2022

    • pathcomp

      Public
      JavaScript
      •0•0•0•0•Updated Mar 18, 2021Mar 18, 2021

    • PanNuke-metrics

      Public archive
      Evaluation code for the PanNuke dataset
      Python
      •7•30•0•0•Updated Oct 20, 2020Oct 20, 2020

    • TIAMultiProc

      Public
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 28, 2020Sep 28, 2020

    • Context-Aware-CNN

      Public
      Context-Aware Convolutional Neural Network for Histology Images
      Other
      •1•8•2•0•Updated Jul 6, 2020Jul 6, 2020

    • hover_net

      Public
      Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
      Python
      •
      MIT License
      •272•3•0•0•Updated Mar 15, 2020Mar 15, 2020

    • ExtractPatchesFromAnnotatedRegions

      Public
      This pipeline will extract the annotated regions of WSI annotated by ASAP software based on the inputs such as patch size and resolution
      Python
      •1•3•1•0•Updated Dec 18, 2019Dec 18, 2019

    • TILAb-Score

      Public
      This repository contains the implementation of TILAb-score as described in the original paper.
      Python
      •
      Other
      •4•18•0•0•Updated Oct 3, 2019Oct 3, 2019
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