Repositories list

• cbioportal-cell-explorer

  Public
  TypeScript

  •

  MIT License

  •22 forks•00 stars•1212 issues•1111 pull requests•Updated Apr 24, 2026Apr 24, 2026

• cell-explorer-py

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•66 issues•11 pull request•Updated Apr 24, 2026Apr 24, 2026

• cbioportal

  Public
  cBioPortal for Cancer Genomics

  visualizationsciencecancer-genomics+ 1

  visualizationsciencecancer-genomicsprecision-medicine

  Java

  •

  GNU Affero General Public License v3.0

  •850850 forks•998998 stars•318318 issues•2424 pull requests•Updated Apr 23, 2026Apr 23, 2026

• cbioportal-frontend

  Public
  React Frontend of cBioPortal :tada:

  reactmobxcancer-genomics

  reactmobxcancer-genomics

  TypeScript

  •

  GNU Affero General Public License v3.0

  •425425 forks•143143 stars•00 issues•7171 pull requests•Updated Apr 23, 2026Apr 23, 2026

• datahub

  Public
  A centralized location for storing curated data from cBioPortal

  HTML

  •142142 forks•206206 stars•138138 issues•2121 pull requests•Updated Apr 23, 2026Apr 23, 2026

• cbioportal-core

  Public
  Externalized cBioPortal Core

  Java

  •2727 forks•44 stars•2626 issues•1717 pull requests•Updated Apr 23, 2026Apr 23, 2026

• cbioportal-navigator

  Public
  MCP server for natural language user query -> cBioPortal URL

  TypeScript

  •33 forks•22 stars•44 issues•00 pull requests•Updated Apr 21, 2026Apr 21, 2026

• cancerhotspots

  Public
  Cancer Hotspots

  JavaScript

  •

  GNU Affero General Public License v3.0

  •1010 forks•77 stars•55 issues•22 pull requests•Updated Apr 21, 2026Apr 21, 2026

• cbioportal-mcp

  Public
  Python

  •99 forks•77 stars•1111 issues•55 pull requests•Updated Apr 16, 2026Apr 16, 2026

• cbioportal-publisher

  Public

  cBioPortal/cbioportal-publisher’s past year of commit activity
  Auto publish cBioPortal modules

  33 forks•00 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• LibreChat

  Public
  Enhanced ChatGPT Clone: Features Agents, MCP, DeepSeek, Anthropic, AWS, OpenAI, Responses API, Azure, Groq, o1, GPT-5, Mistral, OpenRouter, Vertex AI, Gemini, A…

  TypeScript

  •

  MIT License

  •7.4k7.4k forks•00 stars•00 issues•22 pull requests•Updated Apr 13, 2026Apr 13, 2026

• cbioportal-test

  Public
  Tests for cBioPortal.

  HTML

  •

  MIT License

  •22 forks•00 stars•00 issues•11 pull request•Updated Apr 11, 2026Apr 11, 2026

• cbioportal-docker-compose

  Public
  Run cBioPortal using Docker Compose

  Shell

  •6060 forks•2323 stars•55 issues•55 pull requests•Updated Apr 8, 2026Apr 8, 2026

• seed_db_test

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 8, 2026Apr 8, 2026

• GSoC

  Public
  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

  6565 forks•199199 stars•3232 issues•11 pull request•Updated Mar 20, 2026Mar 20, 2026

• maf

  Public
  Utility classes for the Mutation Annotation Format (MAF)

  Java

  •00 forks•00 stars•00 issues•11 pull request•Updated Mar 18, 2026Mar 18, 2026

• oncotree

  Public
  Go

  •

  Creative Commons Attribution 4.0 International

  •3030 forks•4747 stars•3131 issues•1414 pull requests•Updated Mar 5, 2026Mar 5, 2026

• cbioportal-mcp-qa

  Public
  Python

  •22 forks•33 stars•1212 issues•22 pull requests•Updated Mar 2, 2026Mar 2, 2026

• installation-map

  Public
  cBioPortal Installation Map

  TypeScript

  •44 forks•00 stars•00 issues•00 pull requests•Updated Mar 1, 2026Mar 1, 2026

• clinical-data-dictionary

  Public
  Clinical Attribute Web Service for retrieving clinical attribute names and metadata.

  Java

  •99 forks•66 stars•44 issues•44 pull requests•Updated Feb 25, 2026Feb 25, 2026

• cbioportal-vitessce-proxy

  Public
  TypeScript

  •11 fork•00 stars•22 issues•11 pull request•Updated Feb 3, 2026Feb 3, 2026

• datahub-study-curation-tools

  Public
  Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.

  HTML

  •

  GNU Affero General Public License v3.0

  •2020 forks•2222 stars•22 issues•55 pull requests•Updated Jan 30, 2026Jan 30, 2026

• project-work-planning

  Public
  A public repository for workflow management

  00 forks•00 stars•2121 issues•00 pull requests•Updated Jan 15, 2026Jan 15, 2026

• cbioportal-helm

  Public
  Helm charts for cBioPortal Kubernetes Deployment

  11 fork•00 stars•11 issue•00 pull requests•Updated Jan 7, 2026Jan 7, 2026

• .github

  Public
  README for cBioPortal Org Page

  22 forks•00 stars•00 issues•11 pull request•Updated Dec 29, 2025Dec 29, 2025

• cbioportal-article-classification

  Public
  Tool for fetching, classifying, and analyzing papers that cite cBioPortal

  Python

  •00 forks•33 stars•00 issues•00 pull requests•Updated Dec 20, 2025Dec 20, 2025

• msk-ecosystems-validator

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 21, 2025Nov 21, 2025

• clickhouse-only-importer-prototype

  Public
  Go

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 5, 2025Nov 5, 2025

• cellxgene-dash

  Public
  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 23, 2025Oct 23, 2025

• mcp_experiments

  Public
  cBioPortal MCP Experiments

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 16, 2025Sep 16, 2025